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Table 2 Putative proteinase families predicted in the Entodinium caudatum transcriptome

From: The transcriptome of the rumen ciliate Entodinium caudatum reveals some of its metabolic features

Catalytic TypeFamilyNo. of TranscriptsNo. of transcripts with SPsaNo. of transcripts with TMsbNo. of transcripts with both SPs and TMs
Aspartic (A)A01A2710127
A01B7 2 
A02B11  
A22A12   
A22B4 21
A282 1 
Total52 178
Cysteine (C)C01A411564
C01B2   
C02A342  
C046   
C123   
C137131
C1922218 
C232   
C26923 
C408211
C4828   
C501   
C5432   
C563   
C591   
C653   
C671   
C696   
C781   
C831   
C85A8   
C871   
C9541 2
C972   
Total42235218
Metallo (M)M01142  
M03A3 1 
M03B4   
M08341053
M12B1   
M14A2   
M14B4   
M14D2   
M15C1   
M15D2 1 
M16A9 1 
M16B1   
M16C2   
M16X2   
M181   
M20C1   
M20X2   
M24A6 2 
M24B1   
M24X4 1 
M28A1   
M28X1   
M382   
M411   
M43A1   
M48A2 2 
M544   
M561 1 
M67A3 1 
M761   
M794 3 
Total11612173
Mixed (P)P0111  
Total11  
Serine (S)S01A4   
S01B30   
Total34   
Total 615   
  1. a SP signal peptide. bTM transmembrane domains