The transcriptome of the rumen ciliate Entodinium caudatum reveals some of its metabolic features

BMC Genomics

Table 3 Signal transduction pathways predicted for in *E. caudatum**

PATH ID	Pathway Name	No. of KOs
ko02020	Two-component system	1
ko04010	MAPK signaling	20
ko04012	ErbB signaling	10
ko04014	Ras signaling	19
ko04015	Rap1 signaling	11
ko04020	Calcium/calmodulin signaling	10
ko04022	cGMP-PKG signaling	13
ko04024	cAMP signaling	13
ko04064	NF-kappa B signaling	6
ko04066	HIF-1 signaling	9
ko04068	FoxO signaling	19
ko04070	Phosphatidylinositol signaling system	21
ko04071	Sphingolipid signaling	19
ko04072	Phospholipase D signaling	18
ko04075	Plant hormone signal transduction	5
ko04150	mTOR signaling	21
ko04151	PI3K-Akt signaling	25
ko04152	AMPK signaling	19
ko04310	Wnt signaling	9
ko04330	Notch signaling	3
ko04340	Hedgehog signaling	9
ko04350	TGF-beta signaling	6
ko04370	VEGF signaling	9
ko04371	Apelin signaling	19
ko04390	Hippo signaling	8
ko04630	JAK-STAT signaling	3
ko04668	TNF signaling	8
ko04062^a	Chemokine signaling	13
ko04620^a	Toll-like receptor signaling	7
ko04621^a	NOD-like receptor signaling	14
ko04622^a	RIG-I-like receptor signaling	5
ko04624^a	Toll and Imd signaling	3
ko04625^a	C-type lectin receptor signaling	12
ko04910^b	Insulin signaling	18
ko04911^b	Insulin secretion	4
ko04912^b	GnRH signaling	12
ko04920^b	Adipocytokine signaling	8
ko04922^b	Glucagon signaling	10
ko04931^c	Insulin resistance	14

*This table is a summary of the signal transduction pathways predicted based on both the GO and KEGG database. All the genes assigned to a GO signal transduction categories were further searched in the KEGG database to find their corresponding KO and pathways involved. All the pathways assigned to a KEGG signal transduction pathway category were listed, plus some other related pathways. ^a, Immune system; ^b, Endocrine system; ^c, Endocrine and metabolic diseases

ISSN: 1471-2164