Skip to main content
Fig. 1 | BMC Genomics

Fig. 1

From: PaCBAM: fast and scalable processing of whole exome and targeted sequencing data

Fig. 1

PaCBAM performances. Time (a) and memory (b) required by PaCBAM to perform a pileup compared to SAMtools, GATK and Sambamba, using increasing number of threads. The figure focuses on the analysis of a BAM file with ~300X mean coverage and ~30Mbp target size using 30 threads. Note that parallel pileup option is not available for SAMtools and red lines in panel a and b refer to the average of single thread executions

Back to article page