Table 5 List of candidate effectors genes in R. necatrix
Gene ID | Description | CDS Length | Signal peptide | Effector predictiona | Localization |
|---|---|---|---|---|---|
SAMD00023353_2100110 | SSCRP protein | 923 | Yes | 0.936 | Apoplastic |
SAMD00023353_1002580 | Hypothetical protein | 183 | No | 0.910 | Non-apoplastic |
SAMD00023353_3000810 | Hypothetical protein | 594 | Yes | 0.890 | Apoplastic |
SAMD00023353_1201650 | Hypothetical protein | 400 | Yes | 0.889 | Apoplastic |
SAMD00023353_4800590 | Hypothetical protein | 292 | No | 0.865 | Non-apoplastic |
SAMD00023353_1401580 | Hypothetical protein | 230 | Yes | 0.864 | Apoplastic |
SAMD00023353_5300760 | Hypothetical protein | 216 | No | 0.842 | Non-apoplastic |
SAMD00023353_2801560 | Putative lactoylglutathione lyase | 630 | No | 0.835 | Non-apoplastic |
SAMD00023353_7700300 | Hypothetical protein | 207 | Yes | 0.829 | Non-apoplastic |
SAMD00023353_1401720 | Hypothetical protein | 189 | No | 0.819 | Apoplastic |
SAMD00023353_9200230 | Hypothetical protein | 240 | Yes | 0.815 | Non-apoplastic |
SAMD00023353_6400250 | Hypothetical protein | 189 | Yes | 0.805 | Apoplastic |
SAMD00023353_0600790 | Hypothetical protein | 288 | No | 0.805 | Non-apoplastic |
SAMD00023353_2100970 | Hypothetical protein | 150 | No | 0.804 | Non-apoplastic |
SAMD00023353_3900800 | Cytochrome P450 monooxygenase | 360 | No | 0.802 | Non-apoplastic |
SAMD00023353_1901790 | Hypothetical protein | 501 | No | 0.784 | Non-apoplastic |
SAMD00023353_13300070 | Hypothetical protein | 273 | No | 0.765 | Non-apoplastic |
SAMD00023353_0104930 | Short-chain dehydrogenase reductase | 195 | No | 0.764 | Non-apoplastic |
SAMD00023353_0103460 | Hypothetical protein | 336 | Yes | 0.756 | Apoplastic |
SAMD00023353_11900020 | Glycoside hydrolase | 705 | Yes | 0.753 | Apoplastic |
SAMD00023353_1700590 | Ankyrin repeat domain-containing 52 | 246 | Yes | 0.731 | Non-apoplastic |
SAMD00023353_2400240 | Hypothetical protein | 585 | Yes | 0.721 | Apoplastic |
SAMD00023353_6500130 | Hypothetical protein | 1340 | Yes | 0.615 | Apoplastic |
SAMD00023353_1000090 | Hypothetical protein | 177 | Yes | 0.603 | Non-apoplastic |