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Fig. 4 | BMC Genomics

Fig. 4

From: Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome

Fig. 4

Phylogenetic diversity of Vlp genes in Izh-4, FR64b, CT13–2396 and LB-2001 genomes. Different colors of nodes indicate different Vlp-subfamilies: yellow - Vlp-α, red - Vlp-γ, blue - Vlp-δ, purple - Vlp-β. ORFs marked by bold font are genes located after the expression site. Locus tags of pseudogenes are marked by the postfix “_ps”. The tree was constructed based on pairwise alignment of nucleotide sequences of ORFs/pseudogenes which contain domains corresponding to the lipoprotein_2 family (PF00921) or the Variable surface antigen VlsE superfamily (SSF74748). Vlp-β genes were used as outgroup to root the tree

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BMC Genomics

ISSN: 1471-2164

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