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Table 3 Raw RNA read pair counts for pooled samples

From: Different transcriptional response between susceptible and resistant common carp (Cyprinus carpio) fish hints on the mechanism of CyHV-3 disease resistance

Pooled samplea

Number of clean raw read pairs

% mapping of readsb

R0_1

16,767,072

48.09

R0_2

22,925,459

21

R0_3

17,896,912

41.2

S0_1

18,800,570

35.94

S0_2

18,024,164

38.28

S0_3

18,505,908

42.97

R4_1

17,370,478

39.81

R4_2

19,861,892

41.95

R4_3

22,849,237

40.87

S4_1

15,788,290

36.16

S4_2

25,499,790

38.22

S4_3

19,324,230

39.91

  1. a R resistant, S susceptible, 0 – day 0 pre infection, 4- day 4 post infection
  2. b % mapping of reads to carp transcriptome from [30]