Table 2 The profiles of prophage insertion site in each ST87 L. monocytogenes
From: Genomic dissection of the most prevalent Listeria monocytogenes clone, sequence type ST87, in China
type | IS2 tRNA-Arg | IS3 comK | IS4 rumA | IS5 tsf | IS6 mat | IS7 50S rRNA methyltransferase | IS8 tRNA-Lys | IS9 tRNA-Ser | IS10 tRNA-Arg | IS11 tRNA-Thr | Strain list |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | + | + | – | – | – | – | – | – | – | – | ICDC-LM188, ICDC-LM0200, ICDC-LM0216, ICDC-LM0263, ICDC-LM0322, ICDC-LM0403, ICDC-LM0417, ICDC-LM0422, ICDC-LM0429, ICDC-LM0452, ICDC-LM0453, ICDC-LM0476, ICDC-LM0484, ICDC-LM0725, ICDC-LM0925, ICDC-LM1074, ICDC-LM1175, ICDC-LM1233, ICDC-LM1361, ICDC-LM1523, ICDC-LM1620, ICDC-LM1686 |
2 | + | – | – | – | – | – | – | – | – | – | ICDC-LM0078, ICDC-LM0158, ICDC-LM544, ICDC-LM1459 |
3 | – | + | – | – | – | – | – | – | – | – | ICDC-LM0077, ICDC-LM0143, ICDC-LM0159, ICDC-LM0250, ICDC-LM1197, ICDC-LM1249, ICDC-LM1496, ICDC-LM1509, ICDC-LM1541, ICDC-LM1515, ICDC-LM1534, ICDC-LM1542, ICDC-LM1551, ICDC-LM1605, ICDC-LM1637, ICDC-LM1784 |
4 | + | + | – | – | – | – | – | – | + | – | ICDC-LM0007, ICDC-LM0053, ICDC-LM0111, ICDC-LM0658, ICDC-LM1203, ICDC-LM1204, ICDC-LM1220, ICDC-LM1572, ICDC-LM1674 |
5 | + | – | – | – | – | – | – | – | + | – | ICDC-LM0099, ICDC-LM1296 |
6 | – | + | – | – | – | – | – | – | + | – | ICDC-LM0138 |
7 | + | + | – | + | – | – | – | – | + | – | ICDC-LM0146 |
8 | – | – | + | – | – | – | – | – | – | – | ICDC-LM0106, ICDC-LM0108, ICDC-LM0336, ICDC-LM0915 |
9 | – | + | + | – | – | – | – | – | – | – | ICDC-LM1016, ICDC-LM1117 |
10 | + | + | – | – | + | – | – | – | – | – | ICDC-LM0441, ICDC-LM0449 |
11 | + | + | – | – | – | – | + | – | – | – | ICDC-LM1520 |
12 | – | + | – | – | – | + | – | – | – | – | ICDC-LM1681, ICDC-LM1682, ICDC-LM1685, ICDC-LM1689 |
13 | – | + | – | – | – | – | – | + | – | – | ICDC-LM0402 |
14 | – | – | – | – | – | – | – | – | – | + | ICDC-LM0208 |
15 | – | – | – | – | – | – | – | – | – | – | ICDC-LM0097 |