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Table 5 Candidate genes near SNPs showing genome-wide significant association with CHD-related phenotypes

From: Genetic dissection of canine hip dysplasia phenotypes and osteoarthritis reveals three novel loci

Chr

Locus derived from the top SNP coordinates ± 200 kb

Gene(s)

OA

FHCDAE

FCI score A vs. FCI score C to E

1

44,961,186–46,479,297

TIAM2, CLDN20, TFB1M, NOX3, ARID1B

x

 

x

9

31,187,114–31,677,907

NOG, C9H17orf67, DGKE

 

x

 

28

28,911,565–29,322,985

PRLHR, CACUL1, NANOS1, EIF3A

 

x

 

Total number of significant loci for the trait

1

2

1

  1. Bold font indicates the gene(s) closest to the associated SNP. The trait associations are marked with x