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Table 3 List of the differentially expressed genes in mock-ATL07 within the most enriched GO terms, which were related to oxidative pathways and stress responses. Highlighted as A are the genes that were differentially expressed in the mock-treated ATL07 plants, AB are the genes that were differentially expressed in both ATL07 mock and ATLWT PVY-inoculated plants

From: Overexpression of a modified eIF4E regulates potato virus Y resistance at the transcriptional level in potato

Related to oxidative pathway
A: ATL07mock B:ATLWT PVYResponseGo TermCategoryDescriptionGeneIDProteinIDAnnotation
 ABDown/DownGO:0006979Presponse to oxidative stress102,578,720XP_015170961.1L-ascorbate_peroxidase_cytosolic(LOC102578720)
 ABDown/DownGO:0006979Presponse to oxidative stress102,594,742XP_015162428.1uncharacterized (LOC102594742)
 ABDown/DownGO:0006979Presponse to oxidative stress102,596,945XP_006341175.1uncharacterized (LOC102596945)
 ABDown/DownGO:0042542Presponse to hydrogen peroxide102,578,969XP_006346594.126.5_kDa_heat_shock_protein_mitochondrial(LOC102578969)
 ABDown/DownGO:0042542Presponse to hydrogen peroxide102,583,475XP_015170470.1heat_shock_70_kDa_protein_8(LOC102583475)
 ABDown/DownGO:0042542Presponse to hydrogen peroxide102,591,190XP_006342905.117.4_kDa_class_III_heat_shock_protein(LOC102591190)
 ABDown/DownGO:0000302Presponse to reactive oxygen species102,594,103XP_006346757.115.7_kDa_heat_shock_protein_peroxisomal(LOC102594103)
 ABDown/DownGO:0000304Presponse to singlet oxygen102,599,238NP_001305587.1(EE)-geranyllinalool_synthase(LOC102599238)
 AUpGO:0016491Foxidoreductase activity102,581,622XP_006345577.1delta(8)-fatty-acid_desaturase-like (LOC102581622)
 AUpGO:0016491Foxidoreductase activity102,581,792XP_006357900.1gibberellin_20_oxidase_1(LOC102581792)
 AUpGO:0016491Foxidoreductase activity102,581,872XP_006350059.1protein_ECERIFERUM_3-like (LOC102581872)
 ADownGO:0016705Foxidoreductase activity102,597,820XP_006363763.1cytochrome_P450_CYP72A219-like (LOC102597820)
 ADownGO:0016705Foxidoreductase activity102,604,056XP_006367342.1cytochrome_P450_83B1-like (LOC102604056)
 AUpGO:0055114Foxidative -reduction process102,592,722XP_006358835.1cytochrome_b561_and_DOMON_domain-containing_protein_At3g25290-like (LOC102592722)
 ABUp/UpGO:0016709Foxidoreductase activity102,598,017XP_006362126.1cytochrome_P450_78A6-like (LOC102598017)
 ADownGO:00055114Foxidative -reduction process102,579,798XP_006358956.1homogentisate_12-dioxygenase (LOC102579798)
 AUpGO:0016705Foxidoreductase activity102,603,519XP_006350395.1premnaspirodiene_oxygenase-like (LOC102603519)
 AUpGO:0016705Foxidoreductase activity102,603,857NP_001305614.1premnaspirodiene_oxygenase(LOC102603857)
 AUpGO:0016705Foxidoreductase activity102,577,568NP_001275219.1CYP86A33_fatty_acid_omega-hydroxylase (LOC102577568)
Related to stress response
 ABDown/DownGO:0006950Presponse to stress102,596,667XP_015166769.1low-temperature-induced_65_kDa_protein-like (LOC102596667)
 ABDown/DownGO:0006950Presponse to stress102,597,686XP_015160032.1late_embryogenesis_abundant_protein-like (LOC102597686)
 ABDown/DownGO:0006950Presponse to stress102,602,565XP_006361910.1low-temperature-induced_78_kDa_protein-like (LOC102602565)
 ABDown/DownGO:0006950Presponse to stress107,057,685XP_015160026.1abscisic_acid_and_environmental_stress-inducible_protein_TAS14-like (LOC107057685)
 ABDown/DownGO:0009611Presponse to wounding102,599,238NP_001305587.1(EE)-geranyllinalool_synthase(LOC102599238)
 ABDown/DownGO:0009408Presponse to heat102,578,969XP_006346594.126.5_kDa_heat_shock_protein_mitochondrial(LOC102578969)
 ABDown/DownGO:0009408Presponse to heat102,583,475XP_015170470.1heat_shock_70_kDa_protein_8(LOC102583475)
 ABDown/DownGO:0009408Presponse to heat102,584,371XP_006345019.122.7_kDa_class_IV_heat_shock_protein-like (LOC102584371)
 ABDown/DownGO:0009408Presponse to heat102,587,639XP_006338640.118.1_kDa_class_I_heat_shock_protein-like (LOC102587639)
 ABDown/DownGO:0009408Presponse to heat102,589,078XP_015170489.117.4_kDa_class_I_heat_shock_protein-like (LOC102589078)
 ABDown/DownGO:0009408Presponse to heat102,589,396XP_006360822.117.4_kDa_class_I_heat_shock_protein-like (LOC102589396)
 ABDown/DownGO:0009408Presponse to heat102,591,190XP_006342905.117.4_kDa_class_III_heat_shock_protein(LOC102591190)
 ABDown/DownGO:0009408Presponse to heat102,594,103XP_006346757.115.7_kDa_heat_shock_protein_peroxisomal(LOC102594103)
 ABDown/DownGO:0009408Presponse to heat102,601,494XP_006349271.122.7_kDa_class_IV_heat_shock_protein-like (LOC102601494)
 ADownGO:0009416Presponse to light stimulus102,600,485XP_015164872.1protein_LIGHT-DEPENDENT_SHORT_HYPOCOTYLS_10-like (LOC102600485)
 ABDown/DownGO:0009644Presponse to high light intensity102,583,475XP_015170470.1heat_shock_70_kDa_protein_8(LOC102583475)
 ABDown/DownGO:0043617Pcellular response to sucrose starvation102,577,576XP_006344055.1asparagine_synthetase_[glutamine-hydrolyzing](LOC102577576)