Skip to main content

Table 1 The list of genes related to PAI 1 of subs. Pertenue and endemicum

From: The pan-genome of Treponema pallidum reveals differences in genome plasticity between subspecies related to venereal and non-venereal syphilis

Protein ID

PAIs Coordinates

Protein Name

Functions

(MF: Molecular Function, BP: Biological Process)

WP_012460510.1

22,054–24,177

VWFA domain-ontaining protein

–

WP_010881470.1

25,115–2538

Hypothetical protein

 

WP_014342234.1

25,459–27,504

Hypothetical protein

–

WP_010881472.1

27,565–28,896

Sodium-dependent tryptophan transporter

MF: Neurotransmitter:sodium symporter activity

BP

WP_010881473.1

29,076–29,786

Potassium transporter Trk

MF: Cation transmembrane transporter activity

BP: Potassium ion transport

WP_010881474.1

29,865–32,936

M16C subfamily peptidase

MF: Catalytic activity, Metal ion binding

BP: Proteolysis

WP_010881475.1

32,965–33,987

Flagellar motor switch protein FliG

MF: Motor activity

BP: Bacterial-type flagellum-dependent cell motility, Chemotaxis

WP_014342235.1

34,060–35,433

Putative hemolysin HlyC

MF: Flavin adenine dinucleotide binding

BP

WP_010881477.1

35,447–36,808

Putative hemolysin HlyC

MF: Flavin adenine dinucleotide binding

BP

WP_039487502.1

36,916–38,193

UDP-N-acetylglucosamine 1-carboxyvinyltransferase

–

WP_010881479.1

38,312–39,946

60 kDa chaperonin

MF: ATP binding Source, Unfolded protein binding

BP: Protein refolding

WP_014342237.1

40,010–40,288

Hypothetical protein

 

WP_010881481.1

40,285–41,085

Ribosomal RNA small subunit methyltransferase E

MF: Methyltransferase activity

BP: rRNA processing

WP_014342238.1

41,082–41,750

Hypothetical protein

 

WP_039486943.1

41,794–42,924

Zinc (Zn2+) ABC superfamily ATP binding cassettetransporter, binding protein

MF: Metal ion binding

BP: Cell adhesion, Metal ion transport

WP_010881484.1

42,942–43,658

Zinc (Zn2+) ABC superfamily ATP binding cassettetransporter, ABC protein

MF: ATPase activity, ATP binding

BP

WP_010881485.1

43,658–44,458

Zinc (Zn2+) ABC superfamily ATP binding cassettetransporter, membrane protein

MF: ATPase-coupled transmembrane transporter activity

BP:

WP_010881486.1

44,567–45,562

Lactate dehydrogenase

MF: D-lactate dehydrogenase activity, NAD binding

BP

WP_014342240.1

45,659–46,711

Putative regulatory protein PfoR

MF: Protein-N (PI)-phosphohistidine-sugar phosphotransferase activity

BP: Phosphoenolpyruvate-dependent sugar phosphotransferase system

WP_014342241.1

46,739–46,918

Hypothetical protein

 

WP_039486948.1

46,945–49,392

Putative methyl-accepting chemotaxis protein

MF: Transmembrane signaling receptor activity

BP: Chemotaxis, Signal transduction

WP_010881491.1

49,513–50,445

Peptidoglycan-binding protein LysM

–