Table 2 The distribution of the enriched INTERPRO annotations of the genes induced by Xoo in the rice microarray data
Annotation | Frequency in the analyzed samples | |
|---|---|---|
Up-regulation | Down-regulation | |
Enzyme | 1087 | 737 |
Dehydrogenase | 149 | 56 |
Synthase/synthetase | 123 | 124 |
Transferase | 122 | 137 |
Kinase | 87 | 32 |
Glycoside hydrolase | 79 | 28 |
ATPase | 60 | 15 |
Helicase | 48 | 10 |
Phosphatase | 48 | 13 |
Peptidase | 38 | 36 |
Reductase | 23 | 72 |
Peroxidase | 20 | 1 |
Lipoxygenase | 16 | 0 |
Other enzymes | 274 | 213 |
Ribosomal protein | 498 | 44 |
Translation protein | 88 | 3 |
Transcription factor | 68 | 63 |
Transporter | 62 | 128 |
WD40 | 39 | 0 |
Tubulin | 32 | 3 |
Heat shock protein | 26 | 8 |
Others | 972 | 842 |