Table 2 Number of differentially regulated PR genes in whitefly-susceptible genotypes
PR gene family | COL2246 | COL1468 | 60444 | TME3 | ALL | PR gene family size (# genes) | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Up | Down | Up | Down | Up | Down | Up | Down | Up | Down | ||
1 | 3 | 3 | 1 | 4 | 2 | 1 | 3 | 1 | 0 | 0 | 18 |
2 | 4 | 10 | 2 | 21 | 2 | 19 | 1 | 12 | 1 | 8 | 50 |
3 | 5 | 2 | 4 | 3 | 6 | 4 | 2 | 1 | 2 | 0 | 22 |
4 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 5 |
5 | 5 | 4 | 2 | 12 | 1 | 6 | 2 | 5 | 0 | 4 | 36 |
6 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 |
7 | 5 | 11 | 3 | 15 | 1 | 16 | 3 | 7 | 0 | 2 | 72 |
8 | 3 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 10 |
9 | 10 | 6 | 6 | 7 | 3 | 7 | 6 | 6 | 2 | 1 | 110 |
10 | 7 | 1 | 4 | 3 | 5 | 3 | 4 | 0 | 2 | 0 | 21 |
11 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 5 |
14 | 1 | 2 | 1 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 30 |
15/16 | 1 | 4 | 1 | 12 | 2 | 7 | 1 | 2 | 1 | 1 | 59 |
17 | 3 | 0 | 1 | 0 | 2 | 0 | 2 | 0 | 1 | 0 | 6 |
Total Number of DEGs | 49 | 43 | 27 | 77 | 29 | 63 | 28 | 36 | 9 | 16 | Â |