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Table 5 Predicted RNA editing site in the B. prionitis chloroplast genome

From: Complete chloroplast genome sequence of Barleria prionitis, comparative chloroplast genomics and phylogenetic relationships among Acanthoideae

Gene Nucleotide Position Amino Acid Position Codon Conversion Amino Acid Conversion Score
accD 722 241 TCG = > TTG S = > L 0.8
atpF 791 264 CCC = > CTC P = > L 1
  914 305 TCA = > TTA S = > L 1
atpI 620 207 TCA = > TTA S = > L 1
matK 469 157 CAC = > TAC H = > Y 1
  661 221 CAT = > TAT H = > Y 1
  1264 422 CAT = > TAT H = > Y 1
ndhA 341 114 TCA = > TTA S = > L 1
  566 189 TCA = > TTA S = > L 1
Gene Nucleotide Position Amino Acid Position Codon Conversion Amino Acid Conversion Score
  1073 358 TCC = > TTC S = > F 1
ndhB 149 50 TCA = > TTA S = > L 1
  467 156 CCA = > CTA P = > L 1
  586 196 CAT = > TAT H = > Y 1
  737 246 CCA = > CTA P = > L 1
  746 249 TCT = > TTT F = > F 1
  830 277 TCA = > TTA S = > L 1
  836 279 TCA = > TTA S = > L 1
  1292 431 TCC = > TTC S = > F 1
  1481 494 CCA = > CTA P = > L 1
ndhD 2 1 ACG = > ATG T = > M 1
  878 293 TCA = > TTA S = > L 1
ndhF 124 42 CTT = > TTT L = > F 1
  290 97 TCA = > TTA S = > L 1
  1504 502 CTT = > TTT L = > F 1
petB 424 142 CGG = > TGG R = > W 1
  617 206 CCA = > CTA P = > L 1
psaB 88 30 CTT = > TTT L = > F 1
  193 65 CTT = > TTT L = > F 1
  422 141 TCT = > TTT S = > F 1
  430 144 CCT = > TTT P = > F 0.86
  431 144 CCT = > TTT P = > F 0.86
  544 182 CTT = > TTT L = > F 1
  1090 364 CTT = > TTT L = > F 1
  1277 426 CCT = > CTT P = > L 1
  1279 427 CTT = > TTT L = > F 0.86
  1546 516 CTT = > TTT L = > F 1
  1961 654 TCT = > TTT S = > F 1
  1993 665 CTC = > TTC L = > F 1
  2096 699 CCT = > CTT P = > L 1
psbE 110 37 TCG = > TTG S = > L 1
  118 40 CCG = > TCG P = > S 1
  146 49 GCC = > GTC A = > V 1
  148 50 CTC = > TTC L = > F 1
Gene Nucleotide Position Amino Acid Position Codon Conversion Amino Acid Conversion Score
rpl2 596 199 GCG = > GTG A = > V 0.86
rpl20 308 103 TCA = > TTA S = > L 0.86
rpoA 887 296 TCG = > TTG S = > L 1
rpoB 473 158 TCA = > TTA S = > L 0.86
  551 184 TCA = > TTA S = > L 1
  566 189 TCG = > TTG S = > L 1
  593 198 GCT = > GTT A = > V 0.86
  1289 430 ACC = > ATC T = > I 0.86
  2426 809 TCA = > TTA S = > L 0.86
rpoC2 2287 763 CGG = > TGG R = > W 1
  3121 1041 CGC = > TGC R = > C 0.8
  3725 1242 TCA = > TTA S = > L 0.86
rps2 248 83 TCA = > TTA S = > L 1
rps8 113 38 ACT = > ATT T = > I 1
  119 40 CCG = > CTG P = > L 1
  257 86 ACC = > ATC T = > I 0.86
rps14 80 27 TCA = > TTA S = > L 1
  149 50 TCA = > TTA S = > L 1