Table 5 Predicted RNA editing site in the B. prionitis chloroplast genome
Gene | Nucleotide Position | Amino Acid Position | Codon Conversion | Amino Acid Conversion | Score |
accD | 722 | 241 | TCG = > TTG | S = > L | 0.8 |
atpF | 791 | 264 | CCC = > CTC | P = > L | 1 |
|  | 914 | 305 | TCA = > TTA | S = > L | 1 |
atpI | 620 | 207 | TCA = > TTA | S = > L | 1 |
matK | 469 | 157 | CAC = > TAC | H = > Y | 1 |
|  | 661 | 221 | CAT = > TAT | H = > Y | 1 |
|  | 1264 | 422 | CAT = > TAT | H = > Y | 1 |
ndhA | 341 | 114 | TCA = > TTA | S = > L | 1 |
|  | 566 | 189 | TCA = > TTA | S = > L | 1 |
Gene | Nucleotide Position | Amino Acid Position | Codon Conversion | Amino Acid Conversion | Score |
|  | 1073 | 358 | TCC = > TTC | S = > F | 1 |
ndhB | 149 | 50 | TCA = > TTA | S = > L | 1 |
|  | 467 | 156 | CCA = > CTA | P = > L | 1 |
|  | 586 | 196 | CAT = > TAT | H = > Y | 1 |
|  | 737 | 246 | CCA = > CTA | P = > L | 1 |
|  | 746 | 249 | TCT = > TTT | F = > F | 1 |
|  | 830 | 277 | TCA = > TTA | S = > L | 1 |
|  | 836 | 279 | TCA = > TTA | S = > L | 1 |
|  | 1292 | 431 | TCC = > TTC | S = > F | 1 |
|  | 1481 | 494 | CCA = > CTA | P = > L | 1 |
ndhD | 2 | 1 | ACG = > ATG | T = > M | 1 |
|  | 878 | 293 | TCA = > TTA | S = > L | 1 |
ndhF | 124 | 42 | CTT = > TTT | L = > F | 1 |
|  | 290 | 97 | TCA = > TTA | S = > L | 1 |
|  | 1504 | 502 | CTT = > TTT | L = > F | 1 |
petB | 424 | 142 | CGG = > TGG | R = > W | 1 |
|  | 617 | 206 | CCA = > CTA | P = > L | 1 |
psaB | 88 | 30 | CTT = > TTT | L = > F | 1 |
|  | 193 | 65 | CTT = > TTT | L = > F | 1 |
|  | 422 | 141 | TCT = > TTT | S = > F | 1 |
|  | 430 | 144 | CCT = > TTT | P = > F | 0.86 |
|  | 431 | 144 | CCT = > TTT | P = > F | 0.86 |
|  | 544 | 182 | CTT = > TTT | L = > F | 1 |
|  | 1090 | 364 | CTT = > TTT | L = > F | 1 |
|  | 1277 | 426 | CCT = > CTT | P = > L | 1 |
|  | 1279 | 427 | CTT = > TTT | L = > F | 0.86 |
|  | 1546 | 516 | CTT = > TTT | L = > F | 1 |
|  | 1961 | 654 | TCT = > TTT | S = > F | 1 |
|  | 1993 | 665 | CTC = > TTC | L = > F | 1 |
|  | 2096 | 699 | CCT = > CTT | P = > L | 1 |
psbE | 110 | 37 | TCG = > TTG | S = > L | 1 |
|  | 118 | 40 | CCG = > TCG | P = > S | 1 |
|  | 146 | 49 | GCC = > GTC | A = > V | 1 |
|  | 148 | 50 | CTC = > TTC | L = > F | 1 |
Gene | Nucleotide Position | Amino Acid Position | Codon Conversion | Amino Acid Conversion | Score |
rpl2 | 596 | 199 | GCG = > GTG | A = > V | 0.86 |
rpl20 | 308 | 103 | TCA = > TTA | S = > L | 0.86 |
rpoA | 887 | 296 | TCG = > TTG | S = > L | 1 |
rpoB | 473 | 158 | TCA = > TTA | S = > L | 0.86 |
|  | 551 | 184 | TCA = > TTA | S = > L | 1 |
|  | 566 | 189 | TCG = > TTG | S = > L | 1 |
|  | 593 | 198 | GCT = > GTT | A = > V | 0.86 |
|  | 1289 | 430 | ACC = > ATC | T = > I | 0.86 |
|  | 2426 | 809 | TCA = > TTA | S = > L | 0.86 |
rpoC2 | 2287 | 763 | CGG = > TGG | R = > W | 1 |
|  | 3121 | 1041 | CGC = > TGC | R = > C | 0.8 |
|  | 3725 | 1242 | TCA = > TTA | S = > L | 0.86 |
rps2 | 248 | 83 | TCA = > TTA | S = > L | 1 |
rps8 | 113 | 38 | ACT = > ATT | T = > I | 1 |
|  | 119 | 40 | CCG = > CTG | P = > L | 1 |
|  | 257 | 86 | ACC = > ATC | T = > I | 0.86 |
rps14 | 80 | 27 | TCA = > TTA | S = > L | 1 |
|  | 149 | 50 | TCA = > TTA | S = > L | 1 |