Table 1 Summary of reads mapping to the reference genome
Type | Anagen-1 | Anagen-2 | Telogen-1 | Telogen-2 | Total |
|---|---|---|---|---|---|
Raw reads | 11,266,194 | 11,520,277 | 16,749,840 | 15,356,591 | 54,892,902 |
N% > 10% | 117 | 225 | 61 | 14 | 131 |
low quality | 28,575 | 27,106 | 39,280 | 36,885 | 28,575 |
5’adapter contaminant | 206 | 550 | 686 | 437 | 1879 |
3 adapter null or insert null | 114,188 | 142,714 | 260,037 | 195,312 | 309,500 |
with ployA/T/G/C | 4883 | 9450 | 10,050 | 8548 | 32,931 |
Clean reads | 11,118,225 | 11,340,232 | 16,439,726 | 15,115,395 | 54,013,578 |