Table 8 Comparative analysis of 6 organelle-like borders of 3 transgenic insertions
From: Genomic variation between PRSV resistant transgenic SunUp and its progenitor cultivar Sunset
Insertion | Border | Sequence type | Length (bp) | Identity with orgDNA (%) | Sunset matches | ||
|---|---|---|---|---|---|---|---|
Identity with inserts (%) | Count | Combined length (bp) | |||||
Functional insert:cp | A | pt | 4000 | 100.00 | 97.01 | 12 | 4180 |
B | pt | 1790 | 99.94 | 99.09 | 6 | 1944 | |
Nonfunctional insert: pseudo-nptII | A | pt | 363 | 100.00 | 97.96 | 1 | 49 |
B | pt | 827 | 100.00 | 93.68 | 5 | 1231 | |
Nonfunctional insert: pseudo-tetA | A | pt | 6299 | 98.60 | 95.09 | 43 | 4242 |
B | mt | 1708 | 98.18 | 99.09 | 2 | 1738 | |