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Table 2 Gene loss in homologous chromosomes 12 of G. hirsutum

From: Improved reconstruction and comparative analysis of chromosome 12 to rectify Mis-assemblies in Gossypium arboreum

Genes loss in AD_A12 chromosome

Genes loss in AD_D12 chromosome

D_D08

A_A12

AD_D12

D_D08

A_A12

AD_A12

Gorai.008G015200

Cotton_A_15792

Gh_D12G0137

Gorai.008G026700

Cotton_A_10793

Gh_A12G0236

Gorai.008G041500

Cotton_A_02090

Gh_D12G0372

Gorai.008G063700

Cotton_A_11364

Gh_A12G0558

Gorai.008G063000

Cotton_A_11373

Gh_D12G0567

Gorai.008G080200

Cotton_A_34337

Gh_A12G0688

Gorai.008G106800

Cotton_A_31201

Gh_D12G0942

Gorai.008G095800

Cotton_A_35255

Gh_A12G0798

Gorai.008G110900

Cotton_A_27718

Gh_D12G0984

Gorai.008G157500

Cotton_A_23027

Gh_A12G1304

Gorai.008G133700

Cotton_A_26243

Gh_D12G1202

Gorai.008G160900

Cotton_A_35616

Gh_A12G1336

Gorai.008G136900

Cotton_A_22647

Gh_D12G1233

Gorai.008G161100

Cotton_A_30134

Gh_A12G1338

Gorai.008G138200

Cotton_A_22060

Gh_D12G1246

Gorai.008G164600

Cotton_A_21032

Gh_A12G1366

Gorai.008G141000

Cotton_A_33185

Gh_D12G1271

Gorai.008G171300

Cotton_A_31070

Gh_A12G1433

Gorai.008G159100

Cotton_A_23046

Gh_D12G1444

Gorai.008G187700

Cotton_A_38211

Gh_A12G1570

Gorai.008G165500

Cotton_A_21019

Gh_D12G1498

Gorai.008G190100

Cotton_A_25801

Gh_A12G1593

Gorai.008G178300

Cotton_A_06177

Gh_D12G1616

Gorai.008G193900

Cotton_A_13403

Gh_A12G1616

Gorai.008G182200

Cotton_A_06137

Gh_D12G1649

Gorai.008G206100

Cotton_A_08046

Gh_A12G1715

Gorai.008G188300

Cotton_A_25782

Gh_D12G1706

Gorai.008G217000

Cotton_A_13589

Gh_A12G1810

Gorai.008G194300

Cotton_A_13398

Gh_D12G1760

Gorai.008G230800

Cotton_A_07177

Gh_A12G1938

Gorai.008G196900

Cotton_A_13365

Gh_D12G1787

Gorai.008G240500

Cotton_A_07085

Gh_A12G2029

Gorai.008G202800

Cotton_A_27500

Gh_D12G1844

Gorai.008G241600

Cotton_A_07074

Gh_A12G2040

Gorai.008G203500

Cotton_A_08073

Gh_D12G1852

Gorai.008G283400

Cotton_A_01373

Gh_A12G2388

Gorai.008G231000

Cotton_A_07174

Gh_D12G2120

Gorai.008G020900

Cotton_A_24594

Gh_A12G0175

Gorai.008G235800

Cotton_A_07128

Gh_D12G2164

Gorai.008G151100

Cotton_A_30237

Gh_A12G1241

Gorai.008G242300

Cotton_A_14421

Gh_D12G2224

Gorai.008G207500

Cotton_A_8032

Gh_A12G1729

Gorai.008G268800

Cotton_A_19242

Gh_D12G2414

Gorai.008G244100

Cotton_A_14443

Gh_A12G2062

Gorai.008G017400

Cotton_A_15816

Gh_D12G0157

   

Gorai.008G077500

Cotton_A_31087

Gh_D12G0672

   

Gorai.008G170600

Cotton_A_25559

Gh_D12G1546

   

Gorai.008G194300

Cotton_A_13398

Gh_D12G1760

   
  1. A_A12, G. arboreum chromosome; D_D08, G. raimondii chromosome; AD_A12 & AD_D12, G. hirsutum chromosomes