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Table 2 The top 20 up-regulated DEGs in I-MSCs compared with Md-MSCs

From: RNA-sequencing reveals positional memory of multipotent mesenchymal stromal cells from oral and maxillofacial tissue transcriptomes

 

FPKM (Mean)

FC (log2)

I-MSCs

Md-MSCs.

VTRNA1–1 b

336.731

<  0.0001

21.693

HOXC10 a

22.068

<  0.0001

17.752

HOXA1 a

2.363

<  0.0001

14.528

HOXA4 a

2.084

<  0.0001

14.347

HOXA-AS2 a,b

2.081

<  0.0001

14.345

HOXC-AS2 a,b

1.64

<  0.0001

14.001

HOXA3 a

1.255

<  0.0001

13.616

WISP3

1.056

<  0.0001

13.366

HOXC6 a

30.353

0.214447

7.145

CACNG8

10.729

0.145148

6.208

HOXC9 a

12.075

0.179618

6.071

LOC400043 b

11.018

0.28332

5.281

CELSR3

7.617

0.223098

5.093

HOXB7 a

16.183

0.494379

5.033

CHI3L1

18.989

0.660538

4.845

ROR2

1.729

0.0724027

4.577

HIST1H2BH

13.291

0.606649

4.454

UNC5C

1.071

0.0503351

4.412

TENM2

1.548

0.0745513

4.376

HOXA11 a

2.189

0.106172

4.366

  1. aHOX gene family, bnon-coding RNAs, FC: Fold change of FPKM value between two samples (log2 of FC)
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BMC Genomics

ISSN: 1471-2164

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