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Table 6 Proteolysis, immune and stress related pathways

From: Transcriptome analysis reveals a molecular understanding of nicotinamide and butyrate sodium on meat quality of broilers under high stocking density

GO ID

Term Type

Description

P-value

Genes

Proteolysis related pathways

 GO:0008234

MF

cysteine-type peptidase activity

0.032179

TINAG; USP24; OTUD1

 GO:0031463

CC

Cul3-RING ubiquitin ligase complex

0.028791

KEAP1; KLHL34

 GO:0010499

BP

proteasomal ubiquitin-independent protein catabolic process

0.03336

KEAP1

 GO:0010508

BP

positive regulation of autophagy

0.034688

SMCR8

 GO:1902902

BP

negative regulation of autophagosome assembly

0.03336

SMCR8

 GO:1901096

BP

regulation of autophagosome maturation

0.011244

SMCR8

 GO:1901098

BP

positive regulation of autophagosome maturation

0.011244

SMCR8

Immune and stress related pathways

 GO:0031867

MF

EP4 subtype prostaglandin E2 receptor binding

0.005638

FEM1A

 GO:0031862

MF

prostanoid receptor binding

0.005638

FEM1A

 GO:0050691

BP

regulation of defense response to virus by host

0.031097

ALKBH5; ALPK1

 GO:0002230

BP

positive regulation of defense response to virus by host

0.026558

ALKBH5; ALPK1

 GO:0071214

BP

cellular response to abiotic stimulus

0.042948

CDKN1A; SLC38A3

 GO:0009991

BP

response to extracellular stimulus

0.022488

ACACB; CDKN1A; SLC38A3

 GO:0031667

BP

response to nutrient levels

0.018345

ACACB; CDKN1A; SLC38A3