Dual indexed library design enables compatibility of in-Drop single-cell RNA-sequencing with exAMP chemistry sequencing platforms

Table 3 Comparison of data alignment quality of the inDrop V2 and TruDrop structures

Sample	Sequencer	Sequencing Depth (reads)	mapped reads (%)	Uniquely aligned reads (%)
V2 Mouse	NextSeq	98,606,967	96.38	67.15
TruDrop Mouse	NovaSeq	43,657,381	96.56	73.48
V2 Human	NextSeq	55,507,773	96.11	84.44
TruDrop Human	NovaSeq	188,061,057	95.12	87.23

ISSN: 1471-2164