Computational identification of receptor-like kinases “RLK” and receptor-like proteins “RLP” in legumes

BMC Genomics

Table 9 Target domains for the classification of RLK/RLP

Functional family^a	Clan or Domain	Number of domains reported in Pfam 31
LRR	CL0022	11
LRR	LRRNT_2	1
Pkinase	CL0016	35
Pkinase	Pkinase_C	1
L-Lectin	CL0004	43
C-Lectin	Lectin_C	1
G-Lectin	B_lectin	1
G-Lectin	S_locus_glycop	1
LysM	LysM	3
PR5K	Thaumatin	1
TNFR	TNFR	6
PAN	CL0168	6
WAK	WAK	1
	GUB_WAK	1
	WAK_assoc	1
Malectin	CL0468	2
EGF	CL0001	18
Stress-antifungal	Stress-antifungal	1
NB-ARC	NB-ARC	217

^aSource: Pfam 31.0 [85]. The domains reported in Table 9 are not exclusively present on RLK and RLP. The NB-ARC belong to R genes, which belong to cytoplasmic proteins and were used to exclude false positive proteins

ISSN: 1471-2164