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Table 2 Characterization of the 62 A. aegypti ABC proteins

From: Phylogenetic analysis of the ATP-binding cassette proteins suggests a new ABC protein subfamily J in Aedes aegypti (Diptera: Culicidae)

Sub-family

Name

VectorBase (accession number)

Size (amino acids)

Predicted topology

Location

(gene)

Orientation

(gene)

A

      
 

AaegABCA3L1

AAEL012702-PA

1669

TMD1-NBD1-TMD2-NBD2

1.726: 372101–377,726

+

 

AaegABCA3L2

AAEL012700-PA

1648

TMD1-NBD1-TMD2-NBD2

1.726: 388899–394,375

+

 

AaegABCA3L3

AAEL012701-PA

1622

TMD1-NBD1-TMD2-NBD2

1.726: 409854–439,050

+

 

AaegABCA3L4

AAEL012698-PA

1652

TMD1-NBD1-TMD2-NBD2

1.726: 450626–459,977

+

 

AaegABCA3L5

AAEL008388-PA

1666

TMD1-NBD1-TMD2-NBD2

1.321: 644618–664,804

–

 

AaegABCA3L6

AAEL008384-PA

1660

TMD1-NBD1-TMD2-NBD2

1.321: 675803–697,600

–

 

AaegABCA3L7

AAEL001938-PA

1673

TMD1-NBD1-TMD2-NBD2

1.46: 792516–818,527

–

 

AaegABCA5L

AAEL004331-PA

1419

TMD1-NBD1-TMD2-NBD2

1.115: 240545–271,476

+

 

AaegABCA5L

AAEL018040-PA

1987

TMD1-NBD1-TMD2-NBD2

3.322: 613800–714,818

–

 

AaegABCA18

AAEL017572-PA

347

NBD

1.176: 1628836–1,629,879

–

B

      
 

AaegABCB1L/AaegP-gp

AAEL010379-PA

1307

TMD1-NBD1-TMD2-NBD2

1.474: 313030–327,570

+

 

AaegABCB6L

AAEL000434-PA

693

TMD-NBD

1.8: 3711414–3,730,662

+

 

AaegABCB7L

AAEL006717-PA

734

TMD-NBD

1.219: 178589–203,717

–

 

AaegABCB8L

AAEL002468-PA

703

TMD-NBD

1.58: 1203051–1,224,141

–

 

AaegABCB10L

AAEL008134-PA

848

TMD-NBD

1.302: 73729–107,503

+

C

      
 

AaegABCC1L1

AAEL005026-PA

1384

TMD0-TMD1-NBD1-TMD2-NBD2

1.139: 1168407–1,184,363

+

 

AaegABCC1L2

AAEL005045-PA

1514

TMD0-TMD1-NBD1-TMD2-NBD2

1.139: 1184563–1,195,380

–

 

AaegABCC1L3

AAEL005030-PA

1396

TMD0-TMD1-NBD1-TMD2-NBD2

1.139: 1233513–1,252,972

–

 

AaegABCC1L4

AAEL004743-PA

1089

TMD0-TMD1-NBD1

1.129: 994901–1,030,978

+

 

AaegABCC1L5

AAEL017209-PA

903

TMD0 -TMD1-NBD1

1.107: 820177–825,969

–

 

AaegABCC4L1

AAEL013567-PA

1311

TMD1-NBD1-TMD2-NBD2

1.871: 281423–317,150

+

 

AaegABCC4L2

AAEL005918-PA

1312

TMD1-NBD1-TMD2-NBD2

1.180: 664096–681,744

–

 

AaegABCC4L3

AAEL005937-PA

1300

TMD1-NBD1-TMD2-NBD2

1.180: 724473–765,746

+

 

AaegABCC4L4

AAEL005929-PA

1413

TMD1-NBD1-TMD2-NBD2

1.180: 786121–801,780

+

 

AaegABCC4L5

AAEL013834-PA

1235

TMD1-NBD1-TMD2-NBD2

1.936: 291553–353,031

–

 

AaegABCC4L6

AAEL012395-PA

1357

TMD1-NBD1-TMD2-NBD2

1.688: 67831–72,390

–

 

AaegABCC4L7

AAEL012386-PA

1351

TMD1-NBD1-TMD2-NBD2

1.688: 87463–91,714

+

 

AaegABCC4L8

AAEL012192-PA

1345

TMD1-NBD1-TMD2-NBD2

1.664: 660781–670,973

–

 

AaegABCC10L

AAEL006622-PA

1540

TMD0-TMD1-NBD1-TMD2-NBD2

1.213: 838086–915,438

+

 

AaegABCC14

AAEL005499-PA

1382

TMD1-NBD1-TMD2-NBD2

1.160: 1362499–1,398,139

–

D

      
 

AaegABCD2L

AAEL002913-PA

659

TMD-NBD

1.71: 1617561–1,676,168

+

 

AaegABCD3L

AAEL010047-PA

753

TMD-NBD

1.449: 843528–895,566

+

E

      
 

AaegABCE1L

AAEL010059-PA

609

NBD1-NBD2

1.450: 713084–727,146

+

F

      
 

AaegABCF1L

AAEL001101-PA

894

NBD1-NBD2

1.23: 2941514–2,961,984

–

 

AaegABCF2L

AAEL010977-PA

602

NBD1-NBD2

1.529: 122943–143,748

–

 

AaegABCF3L

AAEL010359-PA

609

NBD1-NBD2

1.450: 713084–727,146

+

G

      
 

AaegWhite*

AAEL016999-PA

692

NBD-TMD

1.71: 816675–879,820

–

 

AaegABCG/whiteL1

AAEL008138-PA

773

NBD-TMD

1.303: 412767–432,830

+

 

AaegABCG/whiteL2

AAEL008672-PA

689

NBD-TMD

1.340: 378892–469,513

+

 

AaegABCG/whiteL3

AAEL008624-PA

593

NBD-TMD

1.337: 23491–61,022

–

 

AaegABCG/whiteL4

AAEL008632-PA

607

NBD-TMD

1.337: 68512–71,099

–

 

AaegABCG/whiteL5

AAEL008628-PA

571

NBD-TMD

1.337: 85665–99,799

–

 

AaegABCG/whiteL6

AAEL008625-PA

606

NBD-TMD

1.337: 119628–131,014

+

 

AaegABCG/whiteL7

AAEL008629-PA

723

NBD-TMD

1.337: 131034–224,797

–

 

AaegABCG/whiteL8

AAEL008631-PA

759

NBD-TMD

1.337: 276979–394,542

–

 

AaegABCG/whiteL9

AAEL008635-PA

676

NBD-TMD

1.337: 470559–525,334

–

 

AaegABCG/whiteL10

AAEL013372-PA

599

NBD-TMD

1.830: 256110–301,680

+

 

AaegABCG/scarletL1

AAEL003703-PA

616

NBD-TMD

1.94: 984346–994,398

–

 

AaegABCG/scarletL2

AAEL017106-PA

689

NBD-TMD

1.1174: 142758–145,023

–

 

AaegABCG8L1

AAEL012170-PA

275

NBD

1.662: 13565–20,660

+

 

AaegABCG8L2

AAEL011265-PA

787

NBD-TMD

1.561: 434947–481,728

+

H

      
 

AaegABCH1

AAEL005249-PA

872

NBD-TMD

1.147: 1132338–1,176,150

+

 

AaegABCH2

AAEL005491-PA

783

NBD-TMD

1.159: 901905–920,193

+

 

AaegABCH3

AAEL014428-PA

727

NBD-TMD

1.1111: 126773–184,623

+

 

AaegABCH4L5

AAEL018334-PA

814

NBD-TMD

1.181:178199–420,930

–

J

      
 

AaegSMC1L1

AAEL005802-PA

1227

NBD

1.175: 1418947–1,437,720

–

 

AaegSMC1L2

AAEL015592-PA

594

NBD

1.3565: 4371–6283

–

 

AaegSMC2L

AAEL003449-PA

1182

NBD

1.86: 847376–874,751

–

 

AaegSMC3L

AAEL006937-PA

1201

NBD

1.229: 536438–586,285

–

 

AaegSMC4L

AAEL001655-PA

1347

NBD

1.38: 1385452–1,432,324

+

 

AaegSMC6L

AAEL002581-PA

1107

NBD

1.61: 165187–198,927

+

 

AaegRAD50L1

AAEL005245-PA

1034

NBD

1.147: 747831–755,196

–

 

AaegRAD50L2

AAEL014748-PA

1051

NBD

1.1248: 101280–115,288

–

 

AaegMutS6L

AAEL011780-PA

1130

NBD

1.612: 217022–240,932

+