Skip to main content
Fig. 1 | BMC Genomics

Fig. 1

From: MethylStar: A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing data

Fig. 1

Basic workflow of MethylStar showing the pipeline architecture. The left panel shows a standard BS-Seq workflow and on the right are the different components of the MethylStar pipeline integrated as 3 different layers viz. Python, Shell and R. All steps of the pipeline have been parallelized using GNU parallel. MethylStar offers the option for “Quick run” (indicated in red) which runs all steps sequentially in one go or each component can be executed separately. MethylStar incorporates all pre-processing steps of a standard BS-Seq workflow and generates standard outputs that can be used for input into several downstream analysis tools

Back to article page
\