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Table 1 List of individual barcoding genes used for predicting whole-genome relatedness in MLSA

From: Molecular characterization of Pseudomonas from Agaricus bisporus caps reveal novel blotch pathogens in Western Europe

Barcoding gene

Description or product

Length variation

atpD

ATP synthase subunit beta

0471–1380 bp

fusA

Elongation factor G

2106–2148 bp

glnS

Glutamine--tRNA ligase

1482–1701 bp

groeL

Chaperonin 1

1620–1650 bp

gyrB

DNA gyrase subunit B

2379–2424 bp

ileS

Isoleucine--tRNA ligase

2106–2832 bp

recA

DNA repair protein A

0612–1065 bp

recN

DNA repair protein N

1672–1674 bp

rpoB

DNA-directed RNA polymerase (subunit B)

4074–4081 bp

rpoD

RNA polymerase sigma factor (sigma-70)

0519–1851 bp

uvrC

UvrABC system excinuclease (subunit C)

1824–1839 bp