Table 1 Chromosome-wide significant SNPs identified by additive (add), dominant (dom) or both additive and dominant (add/dom) genetic models (MAF: Minor Allele Frequency)
SNP ID | GGAa | Position (bp)b | p-value (add/dom) | -log10(p-value) (add/dom) | Minor allele | MAF | PVEc(%) | Genetic model | |
|---|---|---|---|---|---|---|---|---|---|
add | dom | ||||||||
rs313298834 | 12 | 18,995,645 | 5.03832E-06/3.37289E-06 | 5.298/5.472 | B | 0.34 | 0.8 | 0.83 | add/dom |
rs314011910 | 22 | 1,711,605 | 2.30566E-05 | 4.637 | A | 0.14 | – | 0.69 | dom |
rs313045367 | 26 | 362,590 | 8.41209E-06 | 5.075 | B | 0.15 | 0.77 | – | add |
rs15250929 | 28 | 3,818,934 | 1.93573E-05 | 4.713 | B | 0.2 | – | 0.7 | dom |
rs10724922 | 28 | 3,855,714 | 2.0557E-05 | 4.687 | A | 0.21 | 0.7 | – | add |
rs15251036 | 28 | 3,875,127 | 1.74651E-05 | 4.758 | B | 0.21 | 0.71 | – | add |
rs16212031 | 28 | 3,885,458 | 5.56121E-06/3.19578E-06 | 5.255/5.495 | A | 0.2 | 0.80 | 0.84 | add/dom |
rs314228493 | 28 | 3,888,943 | 4.69378E-06/4.46165E-06 | 5.328/5.351 | B | 0.2 | 0.81 | 0.81 | add/dom |
rs16212040 | 28 | 3,892,786 | 3.35519E-06/3.06323E-06 | 5.474/5.514 | B | 0.2 | 0.83 | 0.84 | add/dom |
rs16212041 | 28 | 3,892,872 | 3.24649E-06/3.06323E-06 | 5.489/5.514 | A | 0.2 | 0.83 | 0.84 | add/dom |
rs317783777 | 28 | 3,919,505 | 2.02328E-05 | 4.694 | A | 0.14 | 0.70 | – | add |
rs314418757 | 28 | 3,921,905 | 2.70727E-06/1.62505E-05 | 5.567/4.789 | A | 0.21 | 0.85 | 0.72 | add/dom |
rs315316434 | 28 | 3,971,928 | 1.71745E-05 | 4.765 | A | 0.22 | 0.71 | – | add |
rs314052602 | 28 | 3,990,564 | 1.30589E-05 | 4.884 | B | 0.21 | – | 0.73 | dom |
rs313312915 | 28 | 3,999,772 | 8.56382E-06 | 5.067 | B | 0.22 | 0.76 | – | add |
rs14307369 | 28 | 4,003,865 | 1.37243E-05 | 4.863 | A | 0.21 | 0.73 | – | add |
rs318126353 | 28 | 4,059,366 | 5.35831E-06 | 5.271 | B | 0.23 | – | 0.80 | dom |