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Table 4 The chosen regions for validation by Sanger sequencing for sample_002

From: A comparison of BeadChip and WGS genotyping outputs using partial validation by sanger sequencing

Chromosome Start End INDELs SNVs Total Genotypes Vartype
BeadChip WGS
1 109711850 109712150 0 3 3 TG GG 3 SNVs
TC TT
CG GG
1 109759300 109759400 1 0 1 DD II 1 INDEL
2 85663600 85663700 1 0 1 DI II 1 INDEL
2 233671750 233671850 1 0 1 II DI 1 INDEL
6 160246180 160246690 0 3 3 GG AA 3 SNVs
TT CC
GG AA
10 101010500 101010600 1 0 1 DD II 1 INDEL
13 49792500 49792600 1 0 1 DD DI 1 INDEL
22 37973800 37974170 1 0 1 DD II 1 INDEL