Table 2 Simulated Triploid Tetraallelic Data
From: ComHapDet: a spatial community detection algorithm for haplotype assembly
Cov | Err | ComHapDet | AltHap | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
CPR | MEC | t(s) | σ | M-CPR | CPR | MEC | t(s) | σ | M-CPR | ||
7 | 0.002 | 98.6 | 97 | 76.7 | 0.9 | 99.5 | 89 | 687 | 295.2 | 14 | 93 |
0.01 | 93.8 | 662.1 | 81.2 | 10.8 | 97 | 88.7 | 966.2 | 289.8 | 17.5 | 92.4 | |
0.05 | 97.1 | 1504.7 | 75.5 | 1.6 | 98.9 | 80.1 | 2887.4 | 332.1 | 20.2 | 86.3 | |
10 | 0.002 | 99.8 | 93.7 | 137.5 | 0.17 | 99.9 | 83.7 | 1215.4 | 593.2 | 20.7 | 88.4 |
0.01 | 99.7 | 413.1 | 135.9 | 0.2 | 99.9 | 92.7 | 1029.1 | 592.7 | 14.6 | 95.4 | |
0.05 | 99.4 | 2021.9 | 139.8 | 0.3 | 99.8 | 92.7 | 3632.0 | 592.4 | 14.6 | 95.4 | |
15 | 0.002 | 99.9 | 124.6 | 300.4 | 0.1 | 99.9 | 89.9 | 1725 | 708.5 | 16.1 | 94 |
0.01 | 99.9 | 611.1 | 307.9 | 0.1 | 99.9 | 96 | 1628.6 | 781 | 9.82 | 97.6 | |
0.05 | 99.9 | 2981.5 | 297.2 | 0.2 | 99.9 | 87.4 | 6721.3 | 713.3 | 20.4 | 92.1 | |