Table 4 Simulated Hexaploid Tetraallelic Data
From: ComHapDet: a spatial community detection algorithm for haplotype assembly
Cov | Err | ComHapDet | AltHap | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
CPR | MEC | t(s) | σ | M-CPR | CPR | MEC | t(s) | σ | M-CPR | ||
10 | 0.002 | 78.9 | 2256.6 | 551.1 | 15.6 | 94.1 | 76 | 2022.9 | 977.9 | 20 | 90.6 |
0.01 | 84.1 | 2250.4 | 563.2 | 14 | 95.8 | 70.4 | 3533.7 | 919.9 | 19.9 | 86.8 | |
0.05 | 48.8 | 9578.4 | 526.3 | 25.6 | 81.9 | 75.8 | 7440.7 | 1222.1 | 17.9 | 90 | |
15 | 0.002 | 99.3 | 308.2 | 1295.6 | 0.3 | 99.9 | 70.4 | 4960.6 | 1780.4 | 25.2 | 87.3 |
0.01 | 97.4 | 1528.5 | 1359.1 | 5.4 | 99.4 | 77.7 | 5493.4 | 1624.6 | 23.2 | 89.9 | |
0.05 | 94.7 | 6554.2 | 1207.5 | 11.7 | 98.7 | 65.9 | 13751.6 | 2406.3 | 19 | 87.2 | |
20 | 0.002 | 99.5 | 382.8 | 2097.1 | 0.2 | 99.9 | 77.1 | 7095.1 | 7561.2 | 19.3 | 91.9 |
0.01 | 99.5 | 1654.3 | 2116.5 | 0.2 | 99.9 | 87.3 | 5905.4 | 6862.1 | 18 | 96.1 | |
0.05 | 99.6 | 7912.8 | 2298.9 | 0.2 | 99.9 | 65.1 | 23381.8 | 8563.4 | 24.5 | 86.9 | |