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Table 1 Comparison of tree size based on simulated data

From: GLaMST: grow lineages along minimum spanning tree for b cell receptor sequencing data

Simulation

Seq Length

Mutation Distribution (mutation, insertion, deletion)

IgTree

dnapars

GLaMST

   

Larger

Same

Smaller

Success

Larger

Same

Smaller

Success

Larger

Same

Smaller

Success

1

300

(1.00, 0.00, 0.00)

10

469

21

98%

0

480

20

100%

6

473

21

99%

2

300

(0.98, 0.01, 0.01)

12

468

20

98%

3

477

20

99%

7

472

21

99%

3

300

(0.90, 0.05, 0.05)

54

424

22

89%

34

444

22

93%

11

464

25

98%

4

80

(1.00, 0.00, 0.00)

39

390

71

92%

1

420

79

100%

38

391

71

92%

5

80

(0.98, 0.01, 0.01)

71

373

56

86%

20

416

64

96%

28

414

58

94%

6

80

(0.90, 0.05, 0.05)

130

325

45

74%

103

345

52

79%

26

412

62

95%

7

20

(1.00, 0.00, 0.00)

77

234

189

85%

8

241

251

98%

46

251

203

91%

8

20

(0.98, 0.01, 0.01)

116

201

183

77%

54

221

225

89%

35

236

229

93%

9

20

(0.90, 0.05, 0.05)

278

129

93

44%

234

153

113

53%

47

255

198

91%