Skip to main content

Table 1 Statistics for the mapping of reads

From: Transcriptomic profiling revealed key signaling pathways for cold tolerance and acclimation of two carp species

  Songpu mirror carp Barbless carp
Ctrl_1 Ctrl_2 Ctrl_3 CA_1 CA_2 CA_3 Ctrl_1 Ctrl_2 Ctrl_3 CA_1 CA_2 CA_3
Total reads(M) 12.05X2 11.93X2 13.14X2 12.88X2 12.62X2 13.26X2 15.26X2 14.12X2 14.49X2 13.34X2 13.82X2 13.82X2
Good reads(M) 18.96 16.78 17.78 16.74 22.55 22.74 25.25 20.60 24.07 22.25 24.79 20.38
% Good reads(M) 78.68 70.37 67.64 64.99 89.35 85.72 82.70 72.94 83.07 83.38 89.69 73.72
Overall alignment rate (%) 65.7 68.23 53.87 61.72 67.69 63.15 65.23 65.74 64.81 68.16 63.92 66.98