Table 1 Gene mapping rates of Tn5Prime-defined transcription start sites classified by associations with H3K4me3 and SOX10 ChIP-Seq peaks
From: SOX10-regulated promoter use defines isoform-specific gene expression in Schwann cells
Group | Number of TSSs | Number Within 1 kb of Gene on Same Strand | Percent Within 1 kb of Gene on Same Strand | Number of Unique Genes |
|---|---|---|---|---|
H3K4me3 ChIP and SOX10 ChIP | 4993 | 4698 | 94.09 | 2993 |
H3K4me3 ChIP; No SOX10 ChIP | 7455 | 6918 | 92.80 | 4741 |
SOX10 ChIP; No H3K4me3 ChIP | 431 | 392 | 90.95 | 225 |
No H3K4me3 ChIP and No SOX10 ChIP | 26,827 | 24,867 | 92.69 | 7088 |
Total | 39,706 | 36,875 | 92.87 | 10,000 |