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Table 3 Top 5 GO annotations of the three categories (BP: Biological Process, CC: Cellular Components, MF: Molecular Function) significantly enriched by differentially expressed genes

From: mRNA profile provides novel insights into stress adaptation in mud crab megalopa, Scylla paramamosain after salinity stress

  GO ID Term Annotated Significant Expected P-value
CS vs LS
 BP GO:0055114 oxidation-reduction process 413 4 1.73 0.00017
 BP GO:0006821 chloride transport 14 4 0.06 0.00047
 BP GO:0007155 cell adhesion 75 1 0.31 0.00089
 BP GO:0035295 tube development 10 1 0.04 0.00584
 BP GO:0034220 ion transmembrane transport 250 2 1.05 0.00624
 CC GO:0016021 integral component of membrane 1230 9 4.39 4.2E-06
 CC GO:0016020 membrane 2483 11 8.87 0.0043
 CC GO:0005615 extracellular space 51 1 0.18 0.0125
 CC GO:0005886 plasma membrane 325 3 1.16 0.0304
 CC GO:0030054 cell junction 66 2 0.24 0.033
 MF GO:0046872 metal ion binding 1001 4 4.91 0.00079
 MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 70 1 0.34 0.00107
 MF GO:0005506 iron ion binding 50 1 0.25 0.00128
 MF GO:0005247 voltage-gated chloride channel activity 4 2 0.02 0.00165
 MF GO:0004175 endopeptidase activity 188 1 0.92 0.00337
CS vs HS
 BP GO:0051276 chromosome organization 156 1 0.05 0.02219
 BP GO:0006996 organelle organization 427 1 0.15 0.48991
 BP GO:0006793 phosphorus metabolic process 815 1 0.28 0.76061
 BP GO:0009987 cellular process 4286 2 1.49 0.8504
 BP GO:0006796 phosphate-containing compound metabolic process 799 1 0.28 0.85274
 CC GO:0016021 integral component of membrane 1230 1 0.52 0.000016
 CC GO:0016020 membrane 2483 1 1.04 0.0039
 CC GO:0031224 intrinsic component of membrane 1235 1 0.52 0.1317
 CC GO:0044464 cell part 2983 1 1.25 0.7094
 CC GO:0005623 cell 3005 1 1.26 0.7295
 MF GO:0046872 metal ion binding 1001 1 0.45 0.00059
 MF GO:0043169 cation binding 1018 1 0.45 0.47576
 MF GO:0004659 prenyltransferase activity 10 1 0 0.49112
 MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 27 1 0.01 0.58447
 MF GO:0005488 binding 3747 2 1.67 0.69304
  1. LS Represents low salinity of 14 ppt, CS Represents control group of 25 ppt salinity, HS Represents high salinity of 39 ppt