Name | Contig | Contig position (start) | Contig position (end) | Size (Kb) | GC% | Insertion site | Most common Phage Type | T3SS effector proteins |
---|---|---|---|---|---|---|---|---|
Prophages | ||||||||
 P01 | 1 | 234,098 | 252,152 | 22.3 | 48 | ybhB | Stx2 converting phage vB_EcoP_24B (Podoviridae-like) | traR, nleG, espJ |
 P02 | 2 | 277,808 | 366,514 | 88.7 | 50.1 | ybhB | Enterobacteria phage YYZ-2008 (unclassified) | tRNA’s (Arg, Met), nleG |
 P03 | 3 | 254,241 | 303,995 | 49.8 | 49 | yjbN | Enterobacteria phage mEp460 (lambda-like) | fosA |
 P04 | 4 | 202,949 | 238,006 | 35.1 | 52.4 | yhdJ | 1 Enterobacteria phage P88 (Myoviridae) |  |
 P05 | 4 | 266,538 | 299,976 | 33.4 | 45 | tRNA (argW) | 2 Salmonella Phage 103203_sal5 (Podoviridae) |  |
 P06 | 7 | 249,027 | 263,648 | 14.6 | 48.1 | yjbN | 3 Enterobacteria phage mEp460 (lambda-like) |  |
 P07 | 9 | 307 | 75,279 | 75 | 51.2 | tRNA (serU) | Enterobacteria phage lambda NC_001416 (lambda-like) | traR, hydrolas |
 P08 | 9 | 177,135 | 206,738 | 29.6 | 53.5 | ompW | Enterobacteria phage BP-4795 (lambda-like) | terB, tRNA’s (Met, Arg), colonization factor AcfC |
 P09 | 9 | 218,608 | 250,415 | 31.8 | 51 | yciE | Enterobacteria phage phiP27 (lambda-like) | lom, peptidase S14, stx2a, serine protease |
 P10 | 10 | 69,262 | 87,022 | 17.7 | 43.6 | yegL | Enterobacteria phage BP-4795 (lambda-like) | nleH, espJ, cif* |
 P11 | 11 | 1 | 18,207 | 18.2 | 48.7 |  | Enterobacteria phage mEp237 (lambda-like) | terB |
 P12 | 19 | 402 | 16,927 | 16.5 | 48.9 | ompW | Phage Gifsy-2 (unclassified) | tRNA’s (Arg, Met) |
 P13 | 20 | 2665 | 15,249 | 12.5 | 56.7 |  | Enterobacteria phage BP-4795 (lambda-like) |  |
Integrative elements | ||||||||
 IE01 | 1 | 721,994 | 747,268 | 25.2 | 48 | tRNA (thrW) |  | Intimin-like adhesin fdeC, fimbrial operon |
 IE02 | 3 | 372,461 | 383,975 | 11.5 | 47 | yjjG |  | restriction endonuclease |
 IE03 | 3 | 388,759 | 405,824 | 17 | 48 | tRNA (leuX) |  | RM system, peptidase S8 |
 IE04 | 5 | 390,657 | 406,347 | 15.7 | 44 | tRNA (selC) |  | Putative two-component abortive infection system (Abi), RM system |
 IE05 | 7 | 102,015 | 153,886 | 51.9 | 38 | tRNA (pheU) | LEE insertion site | espA, espB, espD, espF, espG, espH, espL, espS, espZ, map, tir, eae, adhesin efa1, nleE, nleB |
 IE06 | 8 | 1 | 51,161 | 51.1 | 49 | tRNA (metX) | OI-43 insertion site | Urease operon, tellurium resistance, espI |
 IE07 | 8 | 78,288 | 86,298 | 8 | 42 | viuB-fimD |  |  |
 IE08 | 9 | 209,198 | 217,645 | 8.4 | 41 |  |  | nleG, nleG, espO, nleF, nleH, espM |