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Table 1 Characterization of variants

From: Using genomic resources for linkage analysis in Peromyscus with an application for characterizing Dominant Spot

Variant Type

Count

SNP

34,084,607

Insertion

2,038,754

Deletion

2,042,973

Transcript

45,591,302

EXON

769,092

5′ UTR

96,746

3′ UTR

490,685

INTRON

44,630,345

Splice Acceptor

1215

Splice Donor

1327

Splicing Region

87,301

Intergenic

23,148,376

5 kb Upstream

7,302,504

5 kb Downstream

7,337,171

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BMC Genomics

ISSN: 1471-2164

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