Table 4 Number of restriction enzyme recognition sites and average fragment size for P. maniculatus
Restriction Enzyme | CpG | Number of Recognition sites in Peromyscus | Average fragment size in Peromyscus |
|---|---|---|---|
ApaI | Yes | 384,617 | 6431 |
AscI | Yes | 2460 | 1,005,504 |
AvrII | No | 482,638 | 5125 |
BamHI | No | 410,386 | 6027 |
BspQI | No | 457,484 | 5406 |
BssHII | Yes | 115,555 | 21,405 |
DraI | No | 2,508,985 | 986 |
EagI | Yes | 47,415 | 52,167 |
EcoRI | No | 701,369 | 3527 |
FseI | Yes | 13,191 | 187,517 |
HindIII | No | 809,283 | 3056 |
NaeI | Yes | 105,993 | 23,336 |
NarI | Yes | 89,075 | 27,769 |
NheI | No | 377,464 | 6553 |
NotI | Yes | 5842 | 423,406 |
PacI | No | 146,207 | 16,918 |
PmeI | No | 34,572 | 71,547 |
RsrII | Yes | 10,111 | 244,638 |
SacI | No | 608,101 | 4067 |
SacII | Yes | 47,658 | 51,901 |
SaII | Yes | 33,458 | 73,930 |
Sbfl | No | 78,368 | 31,563 |
SgrAI | Yes | 13,574 | 182,226 |
SmaI | Yes | 200,696 | 12,324 |
SpeI | No | 370,097 | 6683 |
SphI | No | 654,548 | 3779 |
SspI | No | 1,559,294 | 1586 |
SwaI | No | 166,068 | 14,894 |
XbaI | No | 748,330 | 3305 |
XhoI | Yes | 109,564 | 22,576 |