Table 2 Differentially expressed genes in miRNA–lncRNA–mRNA network
Gene ID | Annotation | FPKM (pqq) | FPKM (pqh) | log2FC | padj | Up/ Down regulation |
|---|---|---|---|---|---|---|
i1_HQ_Pq_c8712/f2p23/1723 | HSP18.1–1 | 1.58 | 863.66 | 10.48 | 8.90E-06 | Up |
i0_HQ_Pq_c14828/f2p1/773 | HSP18.1–2 | 0.073 | 26.77 | 9.73 | 5.75E-06 | Up |
i1_LQ_Pq_c15779/f1p21/1067 | HSP18.1–4 | 3.36 | 4862.22 | 11.9 | 8.86E-03 | Up |
i0_LQ_Pq_c5978/f1p0/868 | HSP18.1–5 | 0 | 5.54 | Inf | 3.22E-05 | Up |
i2_LQ_Pq_c36814/f1p62/2615 | PSAB | 0 | 0.18 | Inf | 7.43E-03 | Up |
i1_LQ_Pq_c3954/f1p26/1521 | HSP18.2–1 | 0.08 | 37.79 | 10.28 | 6.66E-05 | Up |
i0_LQ_Pq_c3526/f1p0/1014 | HSP18.2–2 | 0.18 | 116.36 | 10.72 | 6.66E-08 | Up |
i0_LQ_Pq_c3196/f1p0/809 | HSP17.8 | 0 | 3.69 | Inf | 1.56E-03 | Up |
i4_LQ_Pq_c2475/f1p0/4683 | hypothetical protein | 0.003 | 0.11 | 6.23 | 1.50E-02 | Up |
i4_LQ_Pq_c3767/f1p2/4265 | hypothetical protein | 0.017 | 1.28 | 7.614 | 2.94E-04 | Up |
i1_LQ_Pq_c12814/f1p0/1512 | Unknown gene | 0.017 | 0.35 | 5.344 | 3.47E-02 | Up |