Fig. 3

Manhattan Plot with P-value results for Vibrio genes correlating with larvae mortalities and ACT plots of the CPI-1 region of six V. coralliilyticus strains. Manhattan plot (top) shows p-values for genes on the Chromosome 1 of V. coralliilyticus RE22 that were tested with a phylogenetic logistic regression for correlation with larvae mortalities. P-values are log-transformed. Blue line corresponds to a significance cut-off of p < 0.005. CPI-1 regions of genomes (bottom) were aligned using BLASTN and results for each pairwise alignment were visualized in Artemis Comparison Tool (ACT) in order to visually compare gene synteny and sequence similarity between CPI-1 regions of V. coralliilyticus strains