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Table 1 Sequence characteristics of GhGRF (Gossypium hirsutum growth-regulating factor) genes and corresponding proteins

From: Genome-wide characterization of the GRF family and their roles in response to salt stress in Gossypium

Gene Name Locus Name Chr Genomics position CDS No. of Introns Size (aa) QLQ Domain WRC Domain MW pI
GhGRF1A Gh_A06G0219 A06 2,427,674–2,430,873 1782 3 593 161–197 232–274 64.42 8.83
GhGRF1D Gh_D06G0212 D06 2,081,549–2,084,687 1731 3 576 162–198 233–275 62.37 6.48
GhGRF2A Gh_A05G1848 A05 19,322,416–19,325,837 1833 3 610 162–198 231–273 65.38 8.36
GhGRF2D Gh_D05G2044 D05 18,868,989–18,872,409 1833 3 610 160–196 231–273 65.58 8.06
GhGRF3A Gh_A05G2252 A05 26,265,366–26,267,943 1815 3 604 143–179 215–257 65.27 6.58
GhGRF3D Gh_D05G2512 D05 25,255,757–25,258,332 1815 3 604 143–179 215–257 65.41 6.48
GhGRF4A Gh_A10G0804 A10 16,451,418–16,453,809 1428 3 475 139–175 210–252 52.25 6.63
GhGRF4D Gh_D10G0959 D10 12,983,506–12,985,893 1428 3 475 139–175 210–252 52.03 6.34
GhGRF5A Gh_A02G1438 A02 80,257,374–80,259,722 1569 3 522 132–168 203–245 57.25 7.71
GhGRF5D Gh_D03G0282 D03 3,085,927–3,089,051 1686 3 561 140–176 211–253 61.24 8.14
GhGRF6A Gh_A02G0827 A02 19,707,965–19,710,598 1695 3 564 144–180 216–258 61.30 7.26
GhGRF6D Gh_D02G0876 D02 16,810,024–16,812,651 1710 3 569 144–180 216–258 61.70 6.97
GhGRF7D Gh_D04G1000 D04 30,836,475–30,838,388 1092 3 363 73–109 147–189 39.96 9.13
GhGRF8A Gh_A09G1285 A09 65,252,506–65,254,792 1218 3 405 83–119 149–191 44.21 8.25
GhGRF8D Gh_D09G1332 D09 40,520,770–40,523,059 1209 3 402 81–117 147–189 43.77 8.54
GhGRF9A Gh_A12G2234 A12 85,044,073–85,048,399 1491 4 496 101–137 158–200 53.51 6.96
GhGRF9D Gh_D12G2699 D12 7626–9481 1491 3 496 102–138 159–201 53.58 6.94
GhGRF10A Gh_A12G2177 A12 84,589,570–84,591,240 1401 3 466 152–188 210–252 50.86 5.89
GhGRF10D Gh_D12G2356 D12 56,690,643–56,692,281 1377 3 458 144–180 202–244 50.05 5.95
GhGRF11A Gh_A02G1205 A02 69,876,127–69,879,623 1008 2 335 30–66 93–135 36.71 7.74
GhGRF11D Gh_D03G0527 D03 9,819,619–9,823,083 1026 2 341 30–66 93–135 37.40 7.81
GhGRF12A Gh_A13G1365 A13 69,805,651–69,809,400 1005 2 334 30–66 93–135 36.42 8.30
GhGRF12D Gh_D13G1673 D13 50,330,408–50,334,209 996 2 331 27–63 90–132 36.13 8.29
GhGRF13A Gh_A10G0492 A10 5,324,275–5,325,500 987 2 328 8–44 75–117 36.51 9.02
GhGRF14A Gh_A13G1692 A13 75,869,496–75,870,119 546 1 181 12–48 75–117 20.73 9.26
GhGRF14D Gh_D13G2042 D13 55,933,517–55,934,140 546 1 181 12–48 75–117 20.99 9.48
GhGRF15A Gh_A11G0749 A11 7,286,137–7,288,429 1338 3 445 70–104 141–183/337–378 48.82 9.59
GhGRF15D Gh_D11G0870 D11 7,509,881–7,512,169 1338 3 445 70–104 141–183/337–378 48.63 9.58
GhGRF16A Gh_A08G1584 A08 94,278,338–94,283,477 774 3 257 65–101 159–189 27.79 8.89
GhGRF16D Gh_D08G1891 D08 56,643,392–56,644,288 744 2 247 65–101 137–179 26.71 8.89
GhGRF17A Gh_A12G2042 A12 83,346,587–83,347,484 729 2 242 58–94 130–172 26.37 9.10
GhGRF17D Gh_D12G2219 D12 55,327,073–55,327,959 804 1 267 83–119 155–197 29.24 9.14
  1. Note: bp Base pair, Chr Chromosome, aa Amino acid, MW Molecular weight, kDa Kilodalton, pI Isoelectric point