Table 2 Gene set analysis of DE genes between HFP and LFP hens with clusterProfiler. The top 5 results of each category with a q value below 0.2 are shown
From: Analysis of the brain transcriptome in lines of laying hens divergently selected for feather pecking
Category | ID | Description | q value |
|---|---|---|---|
GO_BP | GO:0060079 | excitatory postsynaptic potential | 0.116362767 |
GO_BP | GO:0099565 | chemical synaptic transmission, postsynaptic | 0.116362767 |
GO_CC | GO:0005892 | acetylcholine-gated channel complex | 0.164248522 |
GO_CC | GO:0005887 | integral component of plasma membrane | 0.164248522 |
GO_CC | GO:0031226 | intrinsic component of plasma membrane | 0.164248522 |
GO_CC | GO:0000786 | Nucleosome | 0.164248522 |
GO_CC | GO:0044815 | DNA packaging complex | 0.164248522 |
GO_MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | 0.006673199 |
GO_MF | GO:0022848 | acetylcholine-gated cation-selective channel activity | 0.006673199 |
GO_MF | GO:0022824 | transmitter-gated ion channel activity | 0.007209589 |
GO_MF | GO:0022835 | transmitter-gated channel activity | 0.007209589 |
GO_MF | GO:0098960 | postsynaptic neurotransmitter receptor activity | 0.007209589 |
KEGG | gga04514 | Cell adhesion molecules (CAMs) | 0.000581813 |
KEGG | gga05168 | Herpes simplex virus 1 infection | 0.011506023 |