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Table 2 Gene set analysis of DE genes between HFP and LFP hens with clusterProfiler. The top 5 results of each category with a q value below 0.2 are shown

From: Analysis of the brain transcriptome in lines of laying hens divergently selected for feather pecking

Category ID Description q value
GO_BP GO:0060079 excitatory postsynaptic potential 0.116362767
GO_BP GO:0099565 chemical synaptic transmission, postsynaptic 0.116362767
GO_CC GO:0005892 acetylcholine-gated channel complex 0.164248522
GO_CC GO:0005887 integral component of plasma membrane 0.164248522
GO_CC GO:0031226 intrinsic component of plasma membrane 0.164248522
GO_CC GO:0000786 Nucleosome 0.164248522
GO_CC GO:0044815 DNA packaging complex 0.164248522
GO_MF GO:0005231 excitatory extracellular ligand-gated ion channel activity 0.006673199
GO_MF GO:0022848 acetylcholine-gated cation-selective channel activity 0.006673199
GO_MF GO:0022824 transmitter-gated ion channel activity 0.007209589
GO_MF GO:0022835 transmitter-gated channel activity 0.007209589
GO_MF GO:0098960 postsynaptic neurotransmitter receptor activity 0.007209589
KEGG gga04514 Cell adhesion molecules (CAMs) 0.000581813
KEGG gga05168 Herpes simplex virus 1 infection 0.011506023