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Table 1 Summary statistics of the RNA-seq data

From: Genome-wide analysis of long non-coding RNAs in adult tissues of the melon fly, Zeugodacus cucurbitae (Coquillett)

Sample ID Read Sum Base Sum GC (%) N (%) Q30 (%) Genome Mapping Rate
fFB1 71,005,430 21,094,233,520 43.55 0 93.12 82.34%
fFB2 71,920,846 21,287,840,586 43.52 0 93.54 82.50%
fFB3 69,864,623 20,811,064,364 43.52 0 93.23 81.43%
fMG1 65,842,842 19,680,348,232 43.11 0 93.39 33.85%
fMG2 58,622,426 17,525,507,334 40.38 0 93.40 21.06%
fMG3 91,469,944 27,328,946,668 43.28 0 93.78 20.44%
fMT1 76,741,248 22,856,925,352 42.55 0 93.57 76.87%
fMT2 83,141,124 24,796,064,764 42.18 0 93.22 71.47%
fMT3 66,939,800 19,978,132,492 41.35 0 93.19 35.27%
fOV1 61,518,157 18,365,855,324 42.82 0 93.78 84.97%
fOV2 54,295,717 16,193,760,614 42.71 0 93.21 87.65%
fOV3 54,641,144 16,335,419,334 43.13 0 93.09 84.49%
mFB1 76,375,481 22,756,855,810 43.17 0 93.50 83.55%
mFB2 63,341,864 18,878,214,080 42.64 0 93.28 80.40%
mFB3 62,003,794 18,453,417,274 42.44 0 93.52 73.90%
mMG1 90,288,388 26,975,723,848 45.28 0 93.85 25.70%
mMG2 68,545,617 20,457,951,046 46.69 0 93.58 38.44%
mMG3 64,956,243 19,317,213,164 46.69 0 94.01 32.30%
mMT1 60,513,113 18,076,644,312 42.84 0 93.54 80.45%
mMT2 72,498,489 21,656,770,372 42.47 0 93.60 78.64%
mMT3 68,670,761 20,523,605,726 40.10 0 93.37 39.75%
mTE1 57,330,203 17,072,620,942 42.36 0 93.31 84.01%
mTE2 64,218,906 19,189,876,708 42.48 0 93.53 87.38%
mTE3 60,939,729 18,190,973,854 42.43 0 93.61 86.87%
  1. Note: Q30 refers to nucleotides with a quality value above 30 in reads. Genome mapping rate means the percentage of reads mapped to the reference genome
  2. Abbreviations: f/m female/male, MG midgut, MT Malpighian tubules, FB fat body, OV ovary, TE testis