Skip to main content

Table 2 Sequence characteristics and physicochemical properties of MPK genes in C. sinensis

From: MAPK cascade gene family in Camellia sinensis: In-silico identification, expression profiles and regulatory network analysis

Gene ID

Arabidopsis thaliana ID

Locus position

Gene length (bp)

Protein length (aa)

Mol. Wt. (KD)

PI value

No. of negative residues

No. of positive residues

Hydrophobicity

Instability index

TEA016315.1

AT1G10210

Scaffold3231: 722182:725302: -

3120

384

44.22532

6.70

47

45

−0.25

40.56

TEA031435.1

AT1G59580

Scaffold3918: 1637634:1641477: +

3843

421

47.94427

5.97

52

45

−0.22

38.69

TEA032724.1

AT2G18170

Scaffold1618: 847162:843216: -

3946

368

42.22203

7.60

41

42

−0.16

42.71

TEA026040.1

AT3G45640

Scaffold282: 872101:866535: -

5566

372

42.75504

5.25

50

33

−0.19

45.48

TEA020852.1

AT3G45640

Scaffold1757: 1196700:1204130: +

7430

365

41.67796

5.89

48

38

−0.19

39.34

TEA006436.1

AT4G01370

Scaffold2042: 894464:906856: +

12,392

367

42.24318

6.28

46

42

−0.35

41.82

TEA021759.1

AT4G01370

Scaffold214: 887906:895285: +

7379

330

38.20672

5.41

46

35

−0.28

46.69

TEA024415.1

AT2G43790

Scaffold706: 1260385:1247078: -

13,307

507

57.23870

6.06

55

46

−0.23

47.75

TEA012905.1

AT3G18040

Scaffold1154: 723171:731463: +

8292

587

66.86676

6.99

81

80

−0.56

40.45

TEA015676.1

AT3G18040

Scaffold3483: 338662:345558: +

6896

569

64.24032

6.43

73

68

−0.33

40.59

TEA026883.1

AT5G19010

Scaffold3679: 822261:838355: +

16,094

975

110.30164

9.22

120

144

−0.39

43.17

TEA018880.1

AT3G14720

Scaffold327: 693505:699204: +

5699

599

67.27707

9.22

65

80

−0.36

41.47

TEA031053.1

AT5G19010

Scaffold1571: 1385086:1378569: -

6517

587

66.61556

9.09

68

83

−0.37

41.46

TEA022253.1

AT3G14720

Scaffold1213: 332831:319166: -

13,665

792

90.12101

9.25

98

119

−0.41

38.29

TEA022268.1

AT3G18040

Scaffold568: 667443:685736: +

18,293

517

59.33552

6.75

66

64

−0.20

39.91

TEA007103.1

AT1G07880

Scaffold3534: 1335999:1362220: -

26,222

798

90.20825

6.18

92

82

−0.13

42.00