Table 1 Classification of LYP genes in eight Rosaceae species
Group name | Chinese white pear | European pear | Apple | Strawberry | Peach | Mei | Sweet cherry | Black rasberry | |
|---|---|---|---|---|---|---|---|---|---|
(Number of genes) | Pbr | Pco | Md | Fv | Ppe | Pm | Pav | Ro | |
LYK1 | LYK1a | Pbr000107.1 | PCP017929.1 | MD05G1351500 | FvH4_3g01490.1 | ppa017142m | Pm009697 | Pav_sc0000824.1_g060.1.mk | Ro03_G13508 |
(22) | LYK1b1 | Pbr005151.1 | PCP003883.1 | MD09G1111800 | FvH4_6g42640.1 | ppa003023m | Pm015128 | Pav_sc0001077.1_g520.1.mk | Ro06_G06708 |
LYK1b2 | Pbr005152.1 | PCP008886.1 | MD17G1102100 | Â | Â | Pm015129 | Â | Ro06_G17308 | |
LYK1b3 | Pbr021830.1 | Â | Â | Â | Â | Â | Â | Â | |
LYK2 | LYK2 | Pbr014439.4 | PCP023229.1 | MD17G1014100 | FvH4_6g53170.1 | ppa024632m | Pm016182 | Â | Ro06_G03822 |
(7) | |||||||||
LYK3 | LYK3a1 | Pbr019107.1 | PCP003907.1 | MD09G1202500 | FvH4_6g32430.1 | ppa002771m | Pm013417 | Pav_sc0000759.1_g060.1.mk | Ro06_G20150 |
(21) | LYK3a2 | Pbr034737.1 | PCP003981.1 | MD17G1183700 | Â | Â | Â | Pav_sc0002893.1_g120.1.mk | |
LYK3b1 | Pbr036151.1 | PCP000376.1 | MD16G1098600 | Â | ppa019853m | Pm006733 | Pav_sc0006018.1_g500.1.mk | Ro04_G02801 | |
LYK3b2 | Â | PCP002145.1 | MD06G1169200 | Â | Â | Â | Â | Â | |
LYK4/5 | LYK4/5a1 | Pbr022856.1 | Â | MD02G1156000 | FvH4_1g14190.1 | ppa002539m | Pm022870 | Â | Ro05_G22711 |
(24) | LYK4/5a2 | Â | Â | Â | FvH4_5g26710.1 | ppa015910m | Pm026556 | Â | Â |
LYK4/5a3 | Â | Â | Â | FvH4_5g26740.1 | Â | Â | Â | Â | |
LYK4/5b | Pbr022855.1 | Â | Â | FvH4_1g14260.1 | ppa016660m | Pm026555 | Pav_sc0000348.1_g1000.1.mk | Ro01_G00968 | |
LYK4/5c1 | Â | PCP028343.1 | MD00G1205900 | FvH4_3g31710.1 | ppa027141m | Pm001054 | Pav_sc0000480.1_g310.1.mk | Ro03_G07424 | |
LYK4/5c2 | Â | Â | MD11G1140300 | Â | Â | Â | Â | Â | |
NFP | NFP1 | Pbr014715.1 | Â | MD02G1156500 | FvH4_1g14270.1 | ppa002872m | Pm009175 | Pav_sc0000998.1_g140.1.mk | Ro01_G00967 |
(12) | NFP2 | Pbr022854.1 | Â | MD13G1203700 | Â | ppa002949m | Pm026553 | Pav_sc0000348.1_g980.1.mk | |
WAKL | WAKL1 | Pbr035317.1 | PCP000222.1 | MD04G1238700 | Â | ppa002979m | Pm003663 | Pav_sc0000744.1_g060.1.mk | |
(11) | WAKL2 | Â | PCP038026.1 | MD04G1238900 | Â | Â | Â | Pav_sc0004456.1_g300.1.br | |
WAKL3 | Â | Â | MD04G1239400 | Â | Â | Â | Â | Â | |
WAKL4 | Â | Â | MD04G1239000 | Â | Â | Â | Â | Â | |
LYM1/3 | LYM1/3–1 | Pbr002167.1 | PCP020213.1 | MD06G1215700 | FvH4_2g26750.1 | ppa006147m | Pm004817 | Pav_sc0000195.1_g1050.1.mk | Ro02_G01432 |
(18) | LYM1/3–2 | Pbr020280.1 | PCP035131.1 | MD08G1165500 | FvH4_5g12220.1 | ppa017855m | Pm025193 | Pav_sc0000383.1_g420.1.mk | Ro05_G16294 |
LYM1/3–3 | Pbr040557.1 |  | MD15G1351200 |  |  |  |  |  | |
LYM2 | LYM2–1 | Pbr016347.1 | PCP000950.1 | MD00G1083800 | FvH4_2g16390.1 | ppa008092m | Pm020791 | Pav_sc0000377.1_g320.1.mk | Ro02_G18370 |
(9) | LYM2–2 | Pbr039238.2 |  |  |  |  |  |  |  |