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Fig. 1 | BMC Genomics

Fig. 1

From: Long-read sequencing and de novo genome assembly of marine medaka (Oryzias melastigma)

Fig. 1

Examples of comparisons between our de novo contigs and the previous assembly. a, d A dotplot and sketch map between our de novo contig439 and previous assembly, each dot indicates a region of the close similarity between them. Two chromosomes (RACA_21, RACA_24) of the previous assembly mapped to this contig. b, e A dotplot and sketch map between our de novo contig1840 and previous assembly. Two chromosomes (RACA81, RACA_11) of the previous assembly mapped to this contig. c A dotplot between our de novo contig1980 and previous assembly. f One local syntenic block among Japanese medaka, previous assembly and our assembly There are some conserved orthologous genes lacked in the previous assembly (Note: the dotted line in d and e means it is a long chromosome)

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