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Table 2 General statistics for the genomes used by the homolog-based method

From: Long-read sequencing and de novo genome assembly of marine medaka (Oryzias melastigma)

Species

Number

Average transcript length (bp)

Average CDS length (bp)

Average exons per gene

Average exon length (bp)

Average intron length (bp)

Dre

25,619

25,207.59

1642.64

9.42

174.39

2798.97

Gac

20,787

8451.06

1548.67

10.40

148.94

734.44

Gmo

20,095

15,245.21

1459.03

12.72

114.67

1175.90

Ola

19,699

12,145.58

1515.82

10.25

147.82

1148.61

Ome

25,699

14,538.33

1484.55

8.89

167.04

1655.11

Oni

21,437

14,903.11

1714.22

10.90

157.25

1332.07

Tni

19,602

6066.17

1516.59

10.52

144.20

478.02

Tru

18,523

7492.75

1693.53

11.10

152.61

574.33

Xma

20,379

13,751.42

1643.24

10.69

153.77

1250.06

  1. Note: Takifugu rubripes (Tru), Ctenopharyngodon idellus (Cid), Cyprinus carpio (Cca), Danio rerio (Dre), Sinocyclocheilus graham (Sga), Ictalurus punctatus (Ipu), Homo sapiens (Hom) and Mus musculus (Mmu)