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Table 1 Analysis of enriched GO terms for the lncRNA-targeted mRNAs

From: Genome-wide analysis of lncRNA and mRNA expression and endogenous hormone regulation during tension wood formation in Catalpa bungei

GO term

GO ID

Description

GeneRatio (2907)

BgRatio (15307)

P.adjust

Cis regulation

Molecular Function

GO:0017076

purine nucleotide binding

507 (17.44%)

2188 (14.29%)

0.000025

GO:0030554

adenyl nucleotide binding

456 (15.69%)

1946 (12.71%)

0.000025

GO:0032555

purine ribonucleotide binding

496 (17.06%)

2139 (13.97%)

0.000025

GO:0032553

ribonucleotide binding

502 (17.27%)

2172 (14.19%)

0.000025

GO:0032559

adenyl ribonucleotide binding

446 (15.34%)

1906 (12.45%)

0.000027

GO:0005515

protein binding

703 (24.18%)

3169 (20.7%)

0.000029

GO:0043168

anion binding

556 (19.13%)

2469 (16.13%)

0.000102

GO:0035639

purine ribonucleoside triphosphate binding

459 (15.79%)

2020 (13.2%)

0.000337

GO:0000166

nucleotide binding

546 (18.78%)

2449 (16%)

0.000337

GO:1901265

nucleoside phosphate binding

546 (18.78%)

2449 (16%)

0.000337

GO:0005524

ATP binding

409 (14.07%)

1787 (11.67%)

0.000484

Cellular Component

GO:0005634

nucleus

160 (18.69%)

760 (14.36%)

0.021341

Trans regulation

Cellular Component

GO:0005618

cell wall

15 (6.47%)

104 (1.97%)

0.006155

GO:0071944

cell periphery

21 (9.05%)

193 (3.65%)

0.006695

GO:0030312

external encapsulating structure

15 (6.47%)

115 (2.17%)

0.006695

Biological Process

GO:0055114

oxidation-reduction process

95 (15.97%)

1187 (10.36%)

0.005702