Table 1 Sampling and read mapping statistics for each of the 19 tuna samples
Individual | Sampling date and method of death | Weight (kg) | Tissue and abbreviation | NCBI BioSample accession number | Raw reads | Trimmed reads | Reads pseudo-mapping |
|---|---|---|---|---|---|---|---|
P1 | 18th October 2016 (euthanised) | 193 | Atrium (P1_A) | SAMN11160657 | 22,128,885 | 22,126,476 | 93.91% |
Compact ventricle (P1_CV) | SAMN11160658 | 26,586,751 | 26,581,483 | 95.48% | |||
Spongy ventricle (P1_SV) | SAMN11160659 | 25,366,331 | 25,363,514 | 94.11% | |||
Deep red muscle (P1_DR) | SAMN11160660 | 24,797,661 | 24,795,701 | 95.84% | |||
Deep white muscle (P1_DW) | SAMN11160662 | 24,335,135 | 24,333,431 | 98.23% | |||
Superficial red muscle (P1_SR) | SAMN11160661 | 21,802,262 | 21,800,414 | 97.52% | |||
Superficial white muscle (P1_SW) | SAMN11160663 | 24,470,032 | 24,468,269 | 97.86% | |||
P2 | 26th October 2016 (euthanised) | 221.8 | Atrium (P2_A) | SAMN11160664 | 25,730,407 | 25,727,542 | 94.40% |
Compact ventricle (P2_CV) | SAMN11160665 | 21,486,810 | 21,484,438 | 95.19% | |||
Spongy ventricle (P2_SV) | SAMN11160666 | 26,953,930 | 26,951,048 | 95.24% | |||
Deep red muscle (P2_DR) | SAMN11160667 | 24,118,227 | 24,115,974 | 95.87% | |||
Deep white muscle (P2_DW) | SAMN11160669 | 24,675,179 | 24,673,221 | 97.89% | |||
Superficial red muscle (P2_SR) | SAMN11160668 | 25,546,590 | 25,543,903 | 95.76% | |||
Superficial white muscle (P2_SW) | SAMN11160670 | 20,016,233 | 20,014,904 | 97.64% | |||
P3 | 27th January 2016 (spinal cord severed) | 12.3 | Atrium (P3_A) | SAMN11160671 | 23,870,338 | 23,867,309 | 90.48% |
Compact ventricle (P3_CV) | SAMN11160672 | 23,073,063 | 23,070,749 | 93.60% | |||
Spongy ventricle (P3_SV) | SAMN11160673 | 25,881,447 | 25,878,760 | 92.93% | |||
Deep white muscle (P3_DW) | SAMN11160674 | 23,560,483 | 23,558,851 | 98.32% | |||
Superficial white muscle (P3_SW) | SAMN11160675 | 24,966,983 | 24,965,661 | 98.10% |