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Fig. 1 | BMC Genomics

Fig. 1

From: Transcriptome characterization of BPG axis and expression profiles of ovarian steroidogenesis-related genes in the Japanese sardine

Fig. 1

a Venn diagram showing the numbers of shared and unique protein sequences in the Japanese sardine (Sardinops melanostictus) relative to Atlantic herring (Clupea harengus), zebrafish (Danio rerio), medaka (Oryzias latipes), and the NCBI non-redundant protein (nr) databases. Total numbers of sardine proteins having similarity to each database are indicated under the database names. The parentheses indicate the number of unique accessions having similarity in the database. b Cumulative relative frequency distribution of amino acid sequence identity against Atlantic herring, zebrafish, and medaka. Dashed line indicates 80% amino acid identity. c Venn diagram showing the number of transcripts commonly and differentially expressed in the three tissues (brain, pituitary, and gonad) for female and male. The number of transcripts was counted when fragments per kilobase of transcript per million mapped read (FPKM) of each replicate was more than 1

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