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Table 4 Sequence information of Japanese sardine genes revealed by cDNA cloning

From: Transcriptome characterization of BPG axis and expression profiles of ovarian steroidogenesis-related genes in the Japanese sardine

Gene symbol

Gene accession number

Nucleotide sequences of ORF (bp)

Amino acid sequences

Amino acid sequence similarity (%)

Atlantic herring

Zebrafish

Medaka

fshb

LC545605

387

128

57.3

48.9

38.3

lhb

LC545604

426

141

79.9

68.3

57.8

cga

LC545603

345

114

80.7

74.8

62.8

fshr

LC545601

2025

674

81.8

76.8

68.2

lhr

LC545602

2040

679

76.1

73.3

61.8

cyp11a1

LC545596

1560

519

94.0

82.1

82.4

cyp17a1

LC545597

1536

511

94.3

87.5

82.8

cyp19a1a

LC545598

1578

525

91.8

82.9

78.8

hsd3b

LC545599

1125

374

91.7

86.6

81.0

star

LC545600

864

287

94.4

88.2

89.5

  1. Sequence alignments of the amino acid sequences and GenBank accession numbers of Atlantic herring (Clupea harengus), zebrafish (Danio rerio), and medaka (Oryzias latipes) are shown in Additional file 4