Genome-wide detection and sequence conservation analysis of long non-coding RNA during hair follicle cycle of yak

BMC Genomics

Table 1 Information of DELs aligned with numerous lncRNA sequences of cashmere goat

Query	Length	Number of matched alignments	Partner_gene	Regions of matching sequence
TCONS_00008989	1549	13	GPRC5D	243–442
TCONS_00020227	5053	31	TMEM231	2506–3121,4251-4452,4723-4898,4886–5053
TCONS_00058749	2278	25	ASAH2	172–359, 1673–1863
TCONS_00055139	2913	12	BACH1	920–1463
TCONS_00033093	2364	11	EMX2	1929–2091
TCONS_00018581	229	14	FER	1–229
TCONS_00016111	4400	25	GPR157	690–4400(2),103–279(2),277–689(1),2881–3029,3191–3365
TCONS_00027937	6622	35	ISPD	43–160
TCONS_00000176	839	16	LIPG	1–133,131–267
TCONS_00016755	1962	15	LOC102274179	923–1962
TCONS_00027432	1635	30	OAF	581–1397(3),1058–1400,1–171
TCONS_00031781	223	15	COLEC12	1–223
TCONS_00058073	3188	11	LOC102267365	2867–3059

Note: The number in parentheses refer to the aligned numbers in that region (relative less), and the remaining aligned numbers are assigned to other matching regions

ISSN: 1471-2164