Skip to main content

Table 6 Characterization of high-quality BLAST matches obtained in comparison with the transcriptome Penaeus monodon database

From: Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis

 

PM1958

PM4714

Functional Annotation

Calcium-activated chloride channel regulator

Calcium-activated chloride channel regulator 2-like

Epithelial chloride channel -like

PREDICTED: uncharacterized protein LOC108744461 isoform X4

Uncharacterized protein APZ42_034504

E-value

2.01E-29

3.36E-27

% Identity

100

94.2

Bit-Score

128.5

121.2

Translation Frame 1

CRRVRRLPVPLPPRLQPRGAAPI

CRRVRRLPIPLPPRLQPRGAAPI

CST*GTASWTGTRGRTCSTRSRD

CSTSGTASWTGTRGRTCSTRSRD

Translation Frame 2

ADAYAAYPYPYHPGYSHEELPP

ADAYAAYPYPYHPGYSHEELPP

AVHKAQRAGRALAAALVAHEAE

AVHQAQRAGRALAAALVAHEAE

Translation Frame 3

QTRTPPTRTPTTQATATRSCPH

QTRTPPTHTPTTQATATRSCPH

QYIRHSELDGHSRPHL*HTKPR

QYIRHSELDGHSRPHL*HTKPR

  1. Bold characters indicate SNP location within translated protein sequences. Asterisks (*) indicate stop codons