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Table 7 Fungal and algal DEGs predicted to be related to nitrogen flow between the symbionts

From: In vitro resynthesis of lichenization reveals the genetic background of symbiosis-specific fungal-algal interaction in Usnea hakonensis

Symbiont

Gene ID

Corrected p-value

Predicted function

Category

  

Resynthesized

Natural

  

Symbiosis related genes (consistently up-regulated)

 Alga

Ttzw_019382

2.16e-08

1.91e-31

[Protein-PII] uridylyltransferase

nitrogen metabolism

 Alga

Ttzw_009103

1.72e-09

7.46e-46

class I glutamine amidotransferase

nitrogen metabolism

Up-regulated DEGs in resynthesized symbiotic state

 Fungus

Uhk_003065

2.66e-71

1.00

glutaminase GtaA

amino acid synthesis

 Fungus

Uhk_005376

3.05e-03

1.00

pyrroline-5-carboxylate reductase

amino acid synthesis

 Fungus

Uhk_002174

1.99e-03

1.00

amino acid transporter

transport

 Fungus

Uhk_018308

1.43e-09

1.00

amino acid transporter

transport

 Fungus

Uhk_014550

7.35e-09

1.00

nitrate transporter

transport

 Alga

Ttzw_015573

9.05e-14

1.00

amino acid transmembrane transporter

transport

 Alga

Ttzw_000766

4.30e-10

1.00

proline transporter 2

transport

 Alga

Ttzw_001223

3.31e-23

1.00

amidase family protein

nitrogen metabolism

 Alga

Ttzw_003286

6.94e-13

1.00

amidase signature enzyme

nitrogen metabolism

 Alga

Ttzw_010289

2.46e-23

1.00

amidase signature enzyme

nitrogen metabolism

 Alga

Ttzw_017923

1.05e-14

1.00

amidase signature enzyme

nitrogen metabolism

 Alga

Ttzw_019703

3.01e-12

1.00

amidase signature enzyme

nitrogen metabolism

 Alga

Ttzw_006733

1.28e-02

4.46e-01

aminomethyltransferase

nitrogen metabolism

 Alga

Ttzw_012286

2.59e-26

2.77e-15

L-amino acid oxidase

nitrogen metabolism

 Alga

Ttzw_020564

6.83e-10

1.79e-29

urate oxidase II

nitrogen metabolism

Up-regulated DEGs in natural symbiotic state

 Fungus

Uhk_002719

1.00

3.94e-05

amino acid permease

transport

 Fungus

Uhk_003463

1.00

1.17e-04

amino acid transporter

transport

 Fungus

Uhk_001198

1.00

1.47e-68

formate/nitrite transporter

transport

 Fungus

Uhk_003877

1.00

3.26e-101

type 1 glutamine amidotransferase

nitrogen metabolism

 Fungus

Uhk_019576

1.00

1.01e-02

amidase

nitrogen metabolism

 Fungus

Uhk_019577

1.00

2.91e-16

amidase

nitrogen metabolism

 Fungus

Uhk_016086

6.37e-03

4.32e-16

nitrogen metabolic regulation protein

nitrogen metabolism

 Fungus

Uhk_011793

1.00

1.60e-04

nitrogen assimilation transcription factor nira

nitrogen metabolism

 Fungus

Uhk_006314

1.00

3.85e-04

acetylglutamate synthase

amino acid synthesis

 Fungus

Uhk_011793

1.00

1.60e-04

nitrogen assimilation transcription factor nira

nitrogen metabolism

 Alga

Ttzw_008144

1.00

1.34e-06

asparaginase/glutaminase

amino acid synthesis

 Alga

Ttzw_009365

1.00

2.74e-06

glutamine-hydrolyzing asparagine synthase

amino acid synthesis

 Alga

Ttzw_005836

1.00

6.98e-16

pyrroline-5-carboxylate reductase

amino acid synthesis

 Alga

Ttzw_012122

1.00

5.68e-05

amino acid transmembrane transporter

transport

 Alga

Ttzw_016083

1.00

3.74e-04

amino acid transporter

transport

 Alga

Ttzw_009365

1.00

2.74e-06

glutamine-hydrolyzing asparagine synthase

nitrogen metabolism

 Alga

Ttzw_018410

1.00

2.59e-05

amidase signature enzyme

nitrogen metabolism

 Alga

Ttzw_009232

1.00

2.66e-25

class I glutamine amidotransferase

nitrogen metabolism